Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 SNORD97-201ENST00000459187 142 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 MTCYBP35-201ENST00000503630 1137 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AC092325.1-201ENST00000566449 554 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 MIR3198-2-201ENST00000577868 80 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 MIR3146-201ENST00000580367 79 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 BNIP3P30-201ENST00000601184 574 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AC012360.2-201ENST00000609349 391 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 Z82243.1-201ENST00000609432 473 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AL132822.1-201ENST00000617063 513 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AC009269.6-201ENST00000621778 588 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AC092656.1-203ENST00000624134 423 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 MIR126-201ENST00000362291 85 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 RNU6-529P-201ENST00000363383 104 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 RNU6-511P-201ENST00000363496 107 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 RNU6-1164P-201ENST00000364428 107 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 RNU5E-6P-201ENST00000365574 115 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 SNORA67.6-201ENST00000391093 99 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 RNU11-3P-201ENST00000391111 133 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 RNA5SP465-201ENST00000391195 109 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 MIR1304-201ENST00000408243 91 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 RNU6-955P-201ENST00000410497 104 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 RNA5SP501-201ENST00000410990 112 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 EIF4EP2-201ENST00000422816 654 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 TOMM20P4-201ENST00000427861 435 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AL606517.1-201ENST00000446914 387 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AL583843.1-201ENST00000456070 346 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AC093899.1-201ENST00000457984 376 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 Y_RNA.675-201ENST00000516389 149 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AC025811.1-201ENST00000604312 472 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AL592221.1-201ENST00000605266 382 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 MIR15A-201ENST00000607334 83 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AC004908.3-201ENST00000610248 625 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 uc_338.15-201ENST00000615470 191 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 AC004808.1-201ENST00000627671 721 ntBASIC1.09□□□□□ -2.23
HHLA3Q9XRX5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
HHLA3Q9XRX5 AL161722.3-201ENST00000605789 2983 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 Y_RNA.40-201ENST00000362645 93 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 Y_RNA.46-201ENST00000362695 102 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 RNU6-944P-201ENST00000364023 107 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 RNU6-611P-201ENST00000384276 104 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 MIR29C-201ENST00000385231 88 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 SNORA67.5-201ENST00000391036 107 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 RNU6-1242P-201ENST00000391052 103 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AC009310.1-201ENST00000414414 451 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 UBE2V1P10-201ENST00000414685 269 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 MTCO3P46-201ENST00000425787 232 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AL591806.2-201ENST00000433122 173 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 MTND3P1-201ENST00000441336 220 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AC118469.1-201ENST00000442943 488 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AC003071.1-201ENST00000451219 789 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 snoU109.2-201ENST00000459316 135 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AP001025.1-201ENST00000486139 332 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AC119751.4-201ENST00000507498 357 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 RNU6-677P-201ENST00000516914 101 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 RNU6-1092P-201ENST00000516955 87 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AC109329.1-201ENST00000518744 317 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AP005660.1-201ENST00000522972 293 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AC068587.4-201ENST00000533893 186 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AC023050.2-201ENST00000544968 387 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AC123904.2-201ENST00000548059 300 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AL355816.2-201ENST00000610049 647 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 AC090517.3-201ENST00000625170 141 ntBASIC1.08□□□□□ -2.24
HHLA3Q9XRX5 MIR3529-201ENST00000637713 78 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms