Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 CCDC34P1-201ENST00000507441 517 ntBASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 Y_RNA.665-201ENST00000516177 98 ntBASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 RNU6-1314P-201ENST00000517139 104 ntBASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 AC010620.2-201ENST00000600135 313 ntBASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 AC099654.5-201ENST00000636479 350 ntBASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 MTND5P7-201ENST00000413558 1798 ntBASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 AC121333.1-201ENST00000567488 2709 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 Y_RNA.378-201ENST00000365652 113 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 RNU6-395P-201ENST00000365662 106 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 SNORA32.2-201ENST00000384049 122 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 Y_RNA.530-201ENST00000384587 101 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 RNA5SP274-201ENST00000410484 108 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 POLHP1-201ENST00000411806 470 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 RPL32P28-201ENST00000443577 397 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 RNU6-189P-201ENST00000516120 101 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 RNU6-1038P-201ENST00000516516 104 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 RNU6-56P-201ENST00000516986 93 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 RPL7P20-201ENST00000520308 745 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 AC022634.1-201ENST00000520765 532 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 AC243972.3-201ENST00000539655 198 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 TRAV37-201ENST00000553906 342 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 OR11H5P-201ENST00000554039 926 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 AL157871.3-201ENST00000557231 293 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 AC092747.3-201ENST00000603769 301 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 AL136221.1-201ENST00000621449 509 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 AP003400.5-201ENST00000624827 617 ntBASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDK11AQ9UQ88 RNU6-845P-201ENST00000362578 103 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 Y_RNA.70-201ENST00000362886 110 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 RNU6-371P-201ENST00000364283 108 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 RNU6-522P-201ENST00000364497 107 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 RNU6-45P-201ENST00000384471 107 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 Z96811.1-201ENST00000445880 108 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 RPL37P4-201ENST00000448908 268 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 NIPA2P5-201ENST00000452282 464 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 RPL26P9-201ENST00000457466 433 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 RNU7-167P-201ENST00000459160 62 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 AP003122.3-201ENST00000526316 255 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 AC084851.1-201ENST00000529105 249 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 AC087241.2-201ENST00000535801 324 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 AC079600.2-201ENST00000550076 130 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 AL118558.2-201ENST00000556294 238 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 AC005498.1-201ENST00000592125 465 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 IGHVIII-44-202ENST00000636235 289 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 MTND4P35-201ENST00000604257 1375 ntBASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDK11AQ9UQ88 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 Y_RNA.33-201ENST00000362591 102 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 U3.12-201ENST00000364498 214 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 SNORA16.2-201ENST00000390991 127 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 BX682237.1-201ENST00000415016 335 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 RPL21P90-201ENST00000415692 466 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 USP9YP20-201ENST00000419224 558 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 MTCO3P46-201ENST00000425787 232 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 AC091951.2-201ENST00000500762 203 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 SUMO2P6-201ENST00000505273 288 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 RNU2-69P-201ENST00000516061 100 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 RNU6-875P-201ENST00000516488 106 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 RN7SKP256-201ENST00000517201 314 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 BTF3P12-201ENST00000519620 469 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 MTCO3P23-201ENST00000561363 289 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 AC009248.2-201ENST00000619826 254 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 AC022418.1-201ENST00000624118 445 ntBASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CDK11AQ9UQ88 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 MIR9-1-201ENST00000385198 89 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 RNA5SP219-201ENST00000390940 113 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 EIF4E2P1-201ENST00000393781 255 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 RN7SKP32-201ENST00000410167 303 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 RNU2-68P-201ENST00000410878 191 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 AL513477.1-202ENST00000417061 214 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 AC009414.1-201ENST00000427200 443 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms