Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AL445567.2-201ENST00000618935 498 ntBASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 AC099506.2-201ENST00000623074 221 ntBASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
AP4E1Q9UPM8 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 AC009541.1-201ENST00000438279 2662 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.122-201ENST00000363331 96 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 RNA5SP513-201ENST00000364648 118 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 RPS4XP3-201ENST00000398541 413 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 RNU4-30P-201ENST00000410245 143 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 RNU6-651P-201ENST00000411040 105 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 AC016397.1-201ENST00000412463 242 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 AL356867.1-201ENST00000429623 299 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 RPS15AP7-201ENST00000439294 405 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 RPL30P1-201ENST00000488676 339 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 AF186996.7-201ENST00000492781 209 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 RPL29P14-201ENST00000495837 428 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 RN7SKP272-201ENST00000516988 232 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 CYCSP29-201ENST00000533731 318 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 MIR4282-201ENST00000583613 67 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 RMST_6.1-201ENST00000611980 203 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 MIR7151-201ENST00000617477 60 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 AC241585.2-209ENST00000638217 143 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 AL356489.2-201ENST00000566968 3528 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 MARK2P15-201ENST00000432204 2186 ntBASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
AP4E1Q9UPM8 AL136964.1-201ENST00000622038 2990 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 RNA5SP361-201ENST00000362686 118 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.275-201ENST00000364726 110 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 RNU6-1286P-201ENST00000383871 107 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 MIR93-201ENST00000385024 80 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 MIR1290-201ENST00000408735 78 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 RNU2-68P-201ENST00000410878 191 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.625-201ENST00000411256 107 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 AC011742.1-201ENST00000431448 434 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 AC016700.2-201ENST00000446011 156 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 NUTF2P3-201ENST00000448540 384 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 AP000870.1-201ENST00000472927 406 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 AC109925.1-201ENST00000478069 331 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 RPL26P26-201ENST00000480251 434 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 RN7SL604P-201ENST00000492589 296 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 RNU6-1114P-201ENST00000516022 107 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 RNU7-143P-201ENST00000516781 65 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 TRAV28-201ENST00000557548 323 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 MIR3939-201ENST00000582614 106 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 MIR5684-201ENST00000585074 65 ntBASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
AP4E1Q9UPM8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 RNU6-858P-201ENST00000362436 107 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 RNU6-1279P-201ENST00000383917 103 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 RN7SKP51-201ENST00000410781 304 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 AC004552.1-201ENST00000419089 348 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 AL353705.4-201ENST00000449661 238 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 AC009220.1-201ENST00000451614 275 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 SNORD108-201ENST00000459332 71 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 AC073901.1-201ENST00000462471 408 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 RPL21P104-201ENST00000464143 478 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 RPS26P3-201ENST00000470205 348 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 RPS29P26-201ENST00000477483 171 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 AC090543.2-201ENST00000483963 348 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 AC004057.1-201ENST00000485827 348 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 RNU7-200P-201ENST00000516105 62 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 AK6P2-201ENST00000549020 471 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 AC136601.2-201ENST00000604356 474 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms