Protein–RNA interactions for Protein: Q9UMW8

USP18, Ubl carboxyl-terminal hydrolase 18, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP18Q9UMW8 AC012493.2-201ENST00000595083 291 ntBASIC3.74□□□□□ -1.81
USP18Q9UMW8 AL121917.1-203ENST00000605534 577 ntBASIC3.74□□□□□ -1.81
USP18Q9UMW8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.74□□□□□ -1.81
USP18Q9UMW8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.74□□□□□ -1.81
USP18Q9UMW8 U2.21-201ENST00000637295 81 ntBASIC3.74□□□□□ -1.81
USP18Q9UMW8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USP18Q9UMW8 AC022336.2-201ENST00000568966 2538 ntBASIC3.74□□□□□ -1.81
USP18Q9UMW8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
USP18Q9UMW8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.74□□□□□ -1.81
USP18Q9UMW8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP18Q9UMW8 AL049781.1-201ENST00000623195 3585 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP18Q9UMW8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.73□□□□□ -1.81
USP18Q9UMW8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.73□□□□□ -1.81
USP18Q9UMW8 Y_RNA.2-201ENST00000362330 96 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 AC117470.1-201ENST00000381974 330 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 RNU6-1032P-201ENST00000384100 107 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 UBA52P6-201ENST00000399822 382 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 RNU6-55P-201ENST00000411092 107 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 MCFD2P1-201ENST00000417812 300 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.73□□□□□ -1.81
USP18Q9UMW8 AC007560.1-201ENST00000426912 237 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 AC092573.2-201ENST00000434546 243 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.73□□□□□ -1.81
USP18Q9UMW8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.73□□□□□ -1.81
USP18Q9UMW8 AC013470.1-201ENST00000453438 462 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 AC008571.1-201ENST00000467232 300 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.73□□□□□ -1.81
USP18Q9UMW8 RNU2-58P-201ENST00000516403 183 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 RNU6-307P-201ENST00000516743 106 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 AP006245.1-201ENST00000522549 120 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.73□□□□□ -1.81
USP18Q9UMW8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 AC006386.2-201ENST00000624491 75 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 AC012005.1-201ENST00000624575 75 ntBASIC3.73□□□□□ -1.81
USP18Q9UMW8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP18Q9UMW8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP18Q9UMW8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP18Q9UMW8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.73□□□□□ -1.81
USP18Q9UMW8 AL672296.1-201ENST00000427780 2158 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.72□□□□□ -1.81
USP18Q9UMW8 AL353743.1-202ENST00000431724 1695 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP18Q9UMW8 RNU1-33P-201ENST00000364249 162 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 MIR34A-201ENST00000385130 110 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 HSPE1P26-201ENST00000405341 275 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 AL117339.3-201ENST00000418733 162 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.72□□□□□ -1.81
USP18Q9UMW8 AC093151.1-201ENST00000427711 313 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.72□□□□□ -1.81
USP18Q9UMW8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.72□□□□□ -1.81
USP18Q9UMW8 AC011816.1-201ENST00000441346 546 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 RPL23AP62-201ENST00000463396 453 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 AC008155.2-201ENST00000464337 397 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 RN7SL429P-201ENST00000479090 223 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 RN7SL489P-201ENST00000486185 223 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 RN7SL327P-201ENST00000488659 223 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.72□□□□□ -1.81
USP18Q9UMW8 RNU6-699P-201ENST00000517081 110 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.72□□□□□ -1.81
USP18Q9UMW8 HMGB1P14-201ENST00000557424 591 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 ZNF192P1-203ENST00000565888 810 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 AC109446.1-201ENST00000566172 220 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.72□□□□□ -1.81
USP18Q9UMW8 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.72□□□□□ -1.81
USP18Q9UMW8 LARP7P3-201ENST00000579888 337 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 AC008737.2-201ENST00000599446 118 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.72□□□□□ -1.81
USP18Q9UMW8 AC136443.5-201ENST00000603741 370 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 AC083806.3-201ENST00000614016 455 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 RN7SL853P-201ENST00000617250 223 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.72□□□□□ -1.81
USP18Q9UMW8 AL133383.2-201ENST00000622958 2336 ntBASIC3.72□□□□□ -1.81
USP18Q9UMW8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
USP18Q9UMW8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.72□□□□□ -1.81
USP18Q9UMW8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP18Q9UMW8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP18Q9UMW8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
USP18Q9UMW8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USP18Q9UMW8 AC068647.1-201ENST00000489539 2265 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 SNORD9-201ENST00000362566 104 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 RNU6-778P-201ENST00000363269 103 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 Y_RNA.496-201ENST00000384444 101 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.71□□□□□ -1.82
USP18Q9UMW8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.71□□□□□ -1.82
USP18Q9UMW8 COTL1P1-201ENST00000422309 375 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 RPL12P25-201ENST00000455592 494 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 HMGN2P16-201ENST00000456802 261 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 RPL7P47-201ENST00000497299 556 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 AC022493.2-201ENST00000506122 481 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 RNU6-120P-201ENST00000516077 103 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 RNU2-27P-201ENST00000516185 142 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 RNU6-1137P-201ENST00000517073 99 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 AC109479.2-201ENST00000517842 174 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.71□□□□□ -1.82
USP18Q9UMW8 DNAJC8P1-201ENST00000554535 372 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 CYCSP39-201ENST00000565821 309 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USP18Q9UMW8 AC008121.1-201ENST00000603244 268 ntBASIC3.71□□□□□ -1.82
USP18Q9UMW8 AL161629.2-201ENST00000615347 275 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms