Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RPL23AP22-201ENST00000437556 453 ntBASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 AL133547.1-201ENST00000448546 220 ntBASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 MIR2114-201ENST00000516645 80 ntBASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 AP002770.2-201ENST00000543613 532 ntBASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 AL138721.1-201ENST00000616756 179 ntBASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 MIR6134-201ENST00000617606 109 ntBASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 AC016588.2-201ENST00000632484 3021 ntBASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 AC018555.1-201ENST00000567548 1980 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 RNU4-9P-201ENST00000364951 139 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 Y_RNA.358-201ENST00000365491 99 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 MIR888-201ENST00000401186 77 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 RNU2-64P-201ENST00000411315 191 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 RPS20P14-201ENST00000412545 360 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AL358453.1-201ENST00000422522 250 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 SDAD1P3-201ENST00000427380 333 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AP000907.1-201ENST00000428428 510 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 COX6B1P7-201ENST00000430845 235 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 RPL39P38-201ENST00000467018 153 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 RPL23AP14-201ENST00000468281 468 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 RN7SL691P-201ENST00000494487 301 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AC010469.2-201ENST00000496412 480 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 IFITM8P-201ENST00000522529 394 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AP004242.1-201ENST00000533701 349 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 CYP4A43P-201ENST00000568156 121 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AC244505.7-201ENST00000599675 272 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AL355877.2-201ENST00000603670 358 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AL161756.2-201ENST00000604597 246 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AC096772.1-201ENST00000609146 564 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AC084757.4-201ENST00000616350 526 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AC091953.5-201ENST00000622919 233 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AC091905.2-201ENST00000623143 306 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AC241585.2-209ENST00000638217 143 ntBASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CDC42EP3Q9UKI2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 RNA5SP175-201ENST00000364275 119 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 RNA5SP130-201ENST00000364431 114 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 RNA5SP167-201ENST00000365461 116 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 Y_RNA.478-201ENST00000384358 107 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 RNU6-658P-201ENST00000384606 106 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 RPL21P17-201ENST00000397467 475 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 RN7SKP167-201ENST00000411047 285 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 RPL21P38-201ENST00000418090 167 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 BX679664.1-201ENST00000434429 253 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 CYCSP32-201ENST00000440548 321 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 AC124916.1-201ENST00000444020 547 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 PRSS3P4-201ENST00000453323 162 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 TRBVB-201ENST00000477100 408 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 ANXA2P1-201ENST00000505539 926 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 AC099522.1-202ENST00000514718 367 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 Y_RNA.706-201ENST00000516933 99 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 IGKV2D-19-201ENST00000523346 262 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 RN7SL600P-201ENST00000581811 299 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 AC069200.1-201ENST00000609511 323 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 uc_338.32-201ENST00000615087 172 ntBASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 SCARNA4-201ENST00000629045 128 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms