Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL670379.11-201ENST00000604059 253 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC008162.1-201ENST00000604718 254 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AL670379.1-201ENST00000604752 252 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AL670379.5-201ENST00000605253 252 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AL670379.12-201ENST00000605291 253 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AL670379.8-201ENST00000605353 252 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AL670379.7-201ENST00000605823 252 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AL391813.2-201ENST00000609113 322 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 MIR6840-201ENST00000611937 71 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 U6.42-201ENST00000618440 107 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC092794.2-201ENST00000620933 563 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 CKAP2P1-201ENST00000555477 2049 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 RNU5E-5P-201ENST00000365379 116 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 RNY3P13-201ENST00000365542 102 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 SNORA67.3-201ENST00000384366 140 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 SNORA64-201ENST00000384674 134 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 RNU6-817P-201ENST00000391083 104 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 SNORD115.1-201ENST00000391109 76 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 CALM2P3-201ENST00000400429 449 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 OSTCP8-201ENST00000445117 448 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 SNORD97-201ENST00000459187 142 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AC091133.4-201ENST00000511142 308 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AC116347.2-201ENST00000514912 523 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AP002453.2-201ENST00000533503 320 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AC123904.2-201ENST00000548059 300 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AL121579.1-201ENST00000555129 305 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 PCMTD1P2-201ENST00000565017 355 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AP000907.4-201ENST00000604143 237 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 HMGB1P24-202ENST00000615653 685 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 AC138649.3-201ENST00000622154 254 ntBASIC2.59□□□□□ -1.99
CLIP2Q9UDT6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLIP2Q9UDT6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CLIP2Q9UDT6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.58□□□□□ -2
CLIP2Q9UDT6 RNU6-511P-201ENST00000363496 107 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 RNU6-512P-201ENST00000364438 103 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 RNU6-1083P-201ENST00000384022 107 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 RNU6-701P-201ENST00000384059 107 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 Y_RNA.582-201ENST00000391023 95 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 RAC1P6-201ENST00000423911 575 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 AC073464.1-201ENST00000429823 534 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 AL358934.1-201ENST00000432346 324 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 RPL36AP53-201ENST00000432891 316 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 AL451074.3-201ENST00000437709 472 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 IPO7P1-201ENST00000442031 636 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.58□□□□□ -2
CLIP2Q9UDT6 IFNA11P-201ENST00000446352 526 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.58□□□□□ -2
CLIP2Q9UDT6 AMD1P1-201ENST00000457220 922 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 snoU13.15-201ENST00000459407 104 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 SNORD42A-201ENST00000459584 64 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.58□□□□□ -2
CLIP2Q9UDT6 RN7SKP298-201ENST00000515950 94 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.58□□□□□ -2
CLIP2Q9UDT6 RPS3AP23-202ENST00000574601 686 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLIP2Q9UDT6 AC009994.1-201ENST00000606889 253 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 FRG1KP-201ENST00000623592 341 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.58□□□□□ -2
CLIP2Q9UDT6 MIR3688-2-201ENST00000636963 87 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 AC010889.1-201ENST00000566193 2666 ntBASIC2.58□□□□□ -2
CLIP2Q9UDT6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
CLIP2Q9UDT6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLIP2Q9UDT6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
CLIP2Q9UDT6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.57□□□□□ -2
CLIP2Q9UDT6 RNU6-809P-201ENST00000384461 107 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 BX276092.3-201ENST00000424182 230 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 USP9YP18-201ENST00000425912 695 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.57□□□□□ -2
CLIP2Q9UDT6 NEFMP1-201ENST00000443423 1006 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 snoU13.26-201ENST00000459452 105 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 TRBV1-201ENST00000476502 284 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 AC112204.1-201ENST00000502591 103 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 GZMAP1-201ENST00000503054 631 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 AC092436.1-201ENST00000506450 503 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 RNU6-1178P-201ENST00000516674 107 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 SNORD19.2-201ENST00000516978 73 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 RNU6-430P-201ENST00000517078 107 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 AP003122.4-201ENST00000530980 758 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.57□□□□□ -2
CLIP2Q9UDT6 AC007151.1-201ENST00000572774 483 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.57□□□□□ -2
CLIP2Q9UDT6 AL391813.1-201ENST00000603098 260 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 AC121334.2-201ENST00000605387 271 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 AC103710.2-201ENST00000609912 942 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 AL158209.2-201ENST00000619266 216 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 229.3 ms