Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU5B-3P-201ENST00000516601 115 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 AP003072.2-201ENST00000527756 676 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 FAM92A1P1-201ENST00000528023 890 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 AC012213.3-201ENST00000577199 777 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 MIR5694-201ENST00000581190 76 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 DEFB131E-202ENST00000602581 683 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 AL590229.1-201ENST00000603497 542 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 AC245014.2-201ENST00000603689 287 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 AL138889.2-201ENST00000603883 242 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 AC246785.4-201ENST00000605374 287 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 MIR98-201ENST00000606724 119 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 HMGB1P24-202ENST00000615653 685 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 MIR6715A-201ENST00000615929 79 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 MIR203B-201ENST00000636080 86 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 MTND5P17-201ENST00000418405 1603 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 Z75746.1-201ENST00000440243 2080 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 RNU6-1097P-201ENST00000363586 107 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 SNORA67.3-201ENST00000384366 140 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AF228730.1-201ENST00000397972 663 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 FTH1P15-201ENST00000406984 280 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AC016831.2-201ENST00000417179 352 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AL353621.1-201ENST00000418219 243 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 MORF4L1P6-201ENST00000418771 268 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 MTCYBP5-201ENST00000423752 1135 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 RPS3AP44-201ENST00000425466 790 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 RPL31P35-201ENST00000431058 377 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AL353706.1-201ENST00000436728 494 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AL118520.1-201ENST00000450770 291 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 RPS27AP8-201ENST00000452665 445 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 MTAPP1-201ENST00000489154 819 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AC018437.1-201ENST00000492214 406 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 LRRC37A5P-203ENST00000580181 585 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 MIR5692A1-201ENST00000580523 69 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 MIR4658-201ENST00000584344 65 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AC104984.5-201ENST00000586878 94 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AL158827.2-201ENST00000602494 330 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 Z99497.2-201ENST00000603634 310 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AC064872.1-201ENST00000604823 1072 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AL670379.4-201ENST00000605279 254 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AC024581.2-201ENST00000619986 252 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AC093648.1-201ENST00000623546 606 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 AL691447.3-201ENST00000635020 330 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 U6.114-201ENST00000636407 96 ntBASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
CLCF1Q9UBD9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 RNU6-858P-201ENST00000362436 107 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 RNU6-108P-201ENST00000365558 107 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 RNU6-1179P-201ENST00000384667 107 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 MIR10A-201ENST00000385043 110 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 CIR1P3-201ENST00000405137 479 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 RNU6-248P-201ENST00000410720 107 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 C1DP2-201ENST00000418167 426 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 MTND1P27-201ENST00000451117 902 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 AC012308.1-201ENST00000451232 178 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 UBL5P3-201ENST00000475112 231 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 AC011005.2-201ENST00000487324 359 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 MIR892C-201ENST00000516410 77 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 RNU6-685P-201ENST00000517088 95 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 AC079598.5-201ENST00000547460 117 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 AC096772.1-201ENST00000609146 564 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 MIR6840-201ENST00000611937 71 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 AC073114.1-201ENST00000612027 490 ntBASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CLCF1Q9UBD9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 SNORD3E-201ENST00000362899 217 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 Y_RNA.201-201ENST00000364052 96 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 SNORD14B-201ENST00000364533 90 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms