Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC037487.3-201ENST00000606668 112 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.52□□□□□ -1.69
CNTN3Q9P232 MIR6867-201ENST00000610636 67 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 AC011476.5-201ENST00000615594 130 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTN3Q9P232 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTN3Q9P232 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTN3Q9P232 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTN3Q9P232 SPRR2C-201ENST00000290702 219 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 MIR411-201ENST00000362239 96 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 RNU6-222P-201ENST00000362438 107 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 Y_RNA.44-201ENST00000362676 108 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 RNA5SP130-201ENST00000364431 114 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 RNU6-142P-201ENST00000384019 107 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 MIR32-201ENST00000384965 70 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 MIR93-201ENST00000385024 80 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 HSPE1P26-201ENST00000405341 275 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 MIR1193-201ENST00000408109 78 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 AC017079.2-201ENST00000416102 485 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 AC010469.1-201ENST00000463864 576 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 UBE2CP3-201ENST00000502715 450 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 RNU6-1114P-201ENST00000516022 107 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 RNU6-1282P-201ENST00000516735 96 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 Z83818.1-201ENST00000603584 150 ntBASIC4.51□□□□□ -1.69
CNTN3Q9P232 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNTN3Q9P232 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNTN3Q9P232 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.51□□□□□ -1.69
CNTN3Q9P232 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTN3Q9P232 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTN3Q9P232 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNTN3Q9P232 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNTN3Q9P232 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CNTN3Q9P232 RNU1-15P-201ENST00000353977 144 ntBASIC4.5□□□□□ -1.69
CNTN3Q9P232 RNU6-879P-201ENST00000364328 108 ntBASIC4.5□□□□□ -1.69
CNTN3Q9P232 RNU6-102P-201ENST00000384485 104 ntBASIC4.5□□□□□ -1.69
CNTN3Q9P232 RPS4XP3-201ENST00000398541 413 ntBASIC4.5□□□□□ -1.69
CNTN3Q9P232 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNTN3Q9P232 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.5□□□□□ -1.69
CNTN3Q9P232 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.5□□□□□ -1.69
CNTN3Q9P232 HLA-N-201ENST00000437516 135 ntBASIC4.5□□□□□ -1.69
CNTN3Q9P232 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNTN3Q9P232 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.5□□□□□ -1.69
CNTN3Q9P232 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.5□□□□□ -1.69
CNTN3Q9P232 RPL30P1-201ENST00000488676 339 ntBASIC4.5□□□□□ -1.69
CNTN3Q9P232 AC006499.6-201ENST00000511169 607 ntBASIC4.5□□□□□ -1.69
CNTN3Q9P232 AC090281.1-201ENST00000523019 276 ntBASIC4.5□□□□□ -1.69
CNTN3Q9P232 AP002392.1-201ENST00000537692 208 ntBASIC4.5□□□□□ -1.69
CNTN3Q9P232 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.5□□□□□ -1.69
CNTN3Q9P232 ZNF192P1-203ENST00000565888 810 ntBASIC4.5□□□□□ -1.69
CNTN3Q9P232 AC024581.2-201ENST00000619986 252 ntBASIC4.5□□□□□ -1.69
CNTN3Q9P232 AC112484.5-201ENST00000624189 228 ntBASIC4.5□□□□□ -1.69
CNTN3Q9P232 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.5□□□□□ -1.69
CNTN3Q9P232 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.5□□□□□ -1.69
CNTN3Q9P232 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CNTN3Q9P232 AL133383.2-201ENST00000622958 2336 ntBASIC4.5□□□□□ -1.69
CNTN3Q9P232 MAPK10-253ENST00000641010 4072 ntBASIC4.5□□□□□ -1.69
CNTN3Q9P232 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNTN3Q9P232 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNTN3Q9P232 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.49□□□□□ -1.69
CNTN3Q9P232 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
CNTN3Q9P232 MIR372-201ENST00000362225 67 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 RNU6-137P-201ENST00000363680 108 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 RNU6-318P-201ENST00000384283 103 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 Y_RNA.504-201ENST00000384481 104 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 RNA5SP44-201ENST00000410446 133 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 AC011742.1-201ENST00000431448 434 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.49□□□□□ -1.69
CNTN3Q9P232 AC005002.2-201ENST00000438228 269 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.49□□□□□ -1.69
CNTN3Q9P232 RPL30P5-201ENST00000494923 336 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 RNU1-61P-201ENST00000516107 151 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 RNA5SP309-201ENST00000516670 106 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 RNU2-31P-201ENST00000516954 155 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 RN7SKP289-201ENST00000517244 295 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 AK6P2-201ENST00000549020 471 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.49□□□□□ -1.69
CNTN3Q9P232 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.49□□□□□ -1.69
CNTN3Q9P232 MIR3910-1-201ENST00000580936 111 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.49□□□□□ -1.69
CNTN3Q9P232 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNTN3Q9P232 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.49□□□□□ -1.69
CNTN3Q9P232 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.48□□□□□ -1.69
CNTN3Q9P232 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.48□□□□□ -1.69
CNTN3Q9P232 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.48□□□□□ -1.69
CNTN3Q9P232 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms