Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.42□□□□□ -1.86
COL20A1Q9P218 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.42□□□□□ -1.86
COL20A1Q9P218 MIR3672-201ENST00000584290 82 ntBASIC3.42□□□□□ -1.86
COL20A1Q9P218 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.42□□□□□ -1.86
COL20A1Q9P218 AC104237.2-201ENST00000612456 443 ntBASIC3.42□□□□□ -1.86
COL20A1Q9P218 uc_338.15-201ENST00000615470 191 ntBASIC3.42□□□□□ -1.86
COL20A1Q9P218 Z69720.2-201ENST00000624755 279 ntBASIC3.42□□□□□ -1.86
COL20A1Q9P218 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.42□□□□□ -1.86
COL20A1Q9P218 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL20A1Q9P218 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
COL20A1Q9P218 AC091152.2-201ENST00000591628 2569 ntBASIC3.42□□□□□ -1.86
COL20A1Q9P218 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL20A1Q9P218 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL20A1Q9P218 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
COL20A1Q9P218 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL20A1Q9P218 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL20A1Q9P218 Y_RNA.510-201ENST00000384511 114 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 U3.37-201ENST00000408528 213 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 BPY2DP-201ENST00000422208 265 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.41□□□□□ -1.86
COL20A1Q9P218 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.41□□□□□ -1.86
COL20A1Q9P218 AL135938.1-201ENST00000443141 297 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 MRPL50P4-201ENST00000446432 475 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 AMD1P1-201ENST00000457220 922 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL20A1Q9P218 RPL39P5-202ENST00000512505 151 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 RNU6-566P-201ENST00000516790 107 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 RN7SKP272-201ENST00000516988 232 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 AC109479.2-201ENST00000517842 174 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL20A1Q9P218 AP000889.1-201ENST00000530968 660 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 AC025423.5-201ENST00000550230 219 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 AC026371.1-201ENST00000551867 419 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 AL163153.1-201ENST00000554223 283 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.41□□□□□ -1.86
COL20A1Q9P218 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.41□□□□□ -1.86
COL20A1Q9P218 AL591516.1-201ENST00000611326 274 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 AL138726.1-201ENST00000614873 333 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 FAM157A-202ENST00000615155 405 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 RMST_7.1-201ENST00000621935 268 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 MIR7153-201ENST00000637758 57 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 AC000403.1-201ENST00000613696 3585 ntBASIC3.41□□□□□ -1.86
COL20A1Q9P218 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL20A1Q9P218 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COL20A1Q9P218 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL20A1Q9P218 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL20A1Q9P218 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.4□□□□□ -1.86
COL20A1Q9P218 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
COL20A1Q9P218 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
COL20A1Q9P218 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.4□□□□□ -1.86
COL20A1Q9P218 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.4□□□□□ -1.86
COL20A1Q9P218 RNU6-562P-201ENST00000362731 107 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 SNORD56.3-201ENST00000363507 71 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 Y_RNA.356-201ENST00000365475 113 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 SNORD116-11-201ENST00000383882 92 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 RNA5SP252-201ENST00000391131 119 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.4□□□□□ -1.87
COL20A1Q9P218 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.4□□□□□ -1.87
COL20A1Q9P218 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.4□□□□□ -1.87
COL20A1Q9P218 RPL31P12-201ENST00000422587 358 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 UBE2V1P4-201ENST00000425374 344 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 RPL32P28-201ENST00000443577 397 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 AC006539.3-201ENST00000454258 129 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 AC233279.1-201ENST00000455300 423 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 RPS29P20-201ENST00000489592 171 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 FGF7P4-201ENST00000509595 295 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 RNA5SP217-201ENST00000515959 91 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 Y_RNA.691-201ENST00000516611 103 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 RNU6-273P-201ENST00000516937 96 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL20A1Q9P218 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.4□□□□□ -1.87
COL20A1Q9P218 AC007151.1-201ENST00000572774 483 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.4□□□□□ -1.87
COL20A1Q9P218 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.4□□□□□ -1.87
COL20A1Q9P218 AC008121.1-201ENST00000603244 268 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 MIR6134-201ENST00000617606 109 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 XIST_intron.1-201ENST00000619444 68 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 MIR6852-201ENST00000621699 66 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 MIR3199-2-201ENST00000636243 86 ntBASIC3.4□□□□□ -1.87
COL20A1Q9P218 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.4□□□□□ -1.87
COL20A1Q9P218 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
COL20A1Q9P218 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL20A1Q9P218 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.39□□□□□ -1.87
COL20A1Q9P218 ADAM3A-203ENST00000461344 2157 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.39□□□□□ -1.87
COL20A1Q9P218 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.39□□□□□ -1.87
COL20A1Q9P218 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.39□□□□□ -1.87
COL20A1Q9P218 ZNF826P-207ENST00000622273 1910 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 Z98749.2-208ENST00000381646 500 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 SNORA18.3-201ENST00000384122 132 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 RNU6-72P-201ENST00000384285 79 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 AL360182.1-201ENST00000397433 468 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 MIR1289-1-201ENST00000408836 144 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.39□□□□□ -1.87
COL20A1Q9P218 HIGD1AP2-201ENST00000446367 280 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 AC008526.1-201ENST00000509149 338 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 Y_RNA.682-201ENST00000516457 100 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 RNU6-1088P-201ENST00000516850 104 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 SNORD59.2-201ENST00000516873 68 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms