Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 MIR4795-201ENST00000584182 89 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 MIR548AC-201ENST00000585049 88 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 ATP5A1P2-202ENST00000616464 443 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AC009233.1-201ENST00000616477 371 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AC022418.1-201ENST00000624118 445 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AC121333.1-201ENST00000567488 2709 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AC007785.2-201ENST00000598627 1916 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 AC000403.1-201ENST00000613696 3585 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 FAM35BP-202ENST00000497389 3337 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-254P-201ENST00000363377 107 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 U8.9-201ENST00000365667 134 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 SNORA75B-201ENST00000384053 137 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 EIF4E2P1-201ENST00000393781 255 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 RPL23AP58-201ENST00000440453 469 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 NIPA2P5-201ENST00000452282 464 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 AL135752.1-201ENST00000479477 471 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 AC139453.3-201ENST00000493276 369 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-864P-201ENST00000516256 108 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 Y_RNA.675-201ENST00000516389 149 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 SNORA74D-201ENST00000516404 141 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 AP003122.3-201ENST00000526316 255 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 ATP5F1P5-201ENST00000526403 760 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 AC084851.1-201ENST00000529105 249 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 HPRT1P3-201ENST00000539521 576 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 AC093027.1-201ENST00000546698 429 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 AL157871.3-201ENST00000557231 293 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 MIR1273C-201ENST00000578669 77 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 MIR5692A1-201ENST00000580523 69 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 ZNF861P-201ENST00000588126 639 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 AC087045.1-201ENST00000605856 382 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 AC002044.1-201ENST00000606707 158 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 uc_338.5-201ENST00000611839 155 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 MIR6076-201ENST00000617521 113 ntBASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SMARCAL1Q9NZC9 Z82195.2-201ENST00000612348 18351 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 SNORD113-7-201ENST00000363762 77 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 Y_RNA.509-201ENST00000384506 99 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-1179P-201ENST00000384667 107 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 MIR301A-201ENST00000385261 86 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 MIR1289-1-201ENST00000408836 144 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-1025P-201ENST00000410629 104 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 AL592148.1-201ENST00000413568 445 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 RPLP0P7-201ENST00000416050 667 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 NDUFA5P4-201ENST00000436704 385 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 HMGB1P18-201ENST00000438801 619 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 UBE2V1P7-201ENST00000446395 340 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 MTND4P17-201ENST00000470444 350 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 SCGB1D5P-201ENST00000515134 247 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 SNORA19.2-201ENST00000516013 114 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 SNORA14.1-201ENST00000516113 141 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 RNA5SP165-201ENST00000517142 115 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 RNA5SP291-201ENST00000517222 105 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 MTCO3P23-201ENST00000561363 289 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 MIR3672-201ENST00000584290 82 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 AL670379.10-201ENST00000604330 253 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 AC136601.2-201ENST00000604356 474 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 AL670379.9-201ENST00000605428 253 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 AC104237.2-201ENST00000612456 443 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 CUL1P1-201ENST00000509510 2425 ntBASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.91□□□□□ -1.94
SMARCAL1Q9NZC9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
SMARCAL1Q9NZC9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.9□□□□□ -1.94
SMARCAL1Q9NZC9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.33-201ENST00000362591 102 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.58-201ENST00000362807 102 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 SNORD3E-201ENST00000362899 217 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.154-201ENST00000363624 102 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 RNY3P1-201ENST00000365085 102 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 RNY3-201ENST00000365484 102 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.490-201ENST00000384413 102 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 MIR483-201ENST00000385070 76 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AL512633.1-201ENST00000399931 655 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 MIR450B-201ENST00000401182 78 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 MIR887-201ENST00000401258 79 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms