Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC098592.1-201ENST00000419352 333 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AL365400.1-201ENST00000431854 640 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 CALM1P1-201ENST00000442082 433 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AL606662.1-201ENST00000445763 553 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AL590365.1-201ENST00000450788 243 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AC010587.1-201ENST00000505809 469 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AC108078.2-201ENST00000510750 236 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AC107393.1-201ENST00000512403 346 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 SCARNA1-201ENST00000517138 166 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AP005639.2-201ENST00000527592 928 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 CYCSP27-201ENST00000527643 293 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 CR383656.8-201ENST00000549046 145 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 MIR4672-201ENST00000583126 81 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 BNIP3P22-201ENST00000593399 556 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AC092192.1-201ENST00000633154 1018 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AL354685.2-201ENST00000448218 1447 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
CLN6Q9NWW5 OR4G2P-201ENST00000328113 903 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 RNU4-82P-201ENST00000362443 140 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 Y_RNA.510-201ENST00000384511 114 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 RNU6-1274P-201ENST00000384557 107 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 RNU6-1179P-201ENST00000384667 107 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 RNU6-584P-201ENST00000410350 95 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 RNU2-32P-201ENST00000411193 191 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 DPH3P2-201ENST00000422618 250 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.62□□□□□ -2.15
CLN6Q9NWW5 AL365184.2-201ENST00000431139 435 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.62□□□□□ -2.15
CLN6Q9NWW5 AC104058.1-201ENST00000448028 297 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 AL353705.4-201ENST00000449661 238 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 AC006026.2-201ENST00000457376 180 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 MTCO2P29-201ENST00000465212 189 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 RNU6-123P-201ENST00000516163 102 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.62□□□□□ -2.15
CLN6Q9NWW5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.62□□□□□ -2.15
CLN6Q9NWW5 AP003392.2-201ENST00000527269 208 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.62□□□□□ -2.15
CLN6Q9NWW5 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.62□□□□□ -2.15
CLN6Q9NWW5 AL139286.2-201ENST00000606838 396 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 RNU6-87P-201ENST00000607561 108 ntBASIC1.62□□□□□ -2.15
CLN6Q9NWW5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CLN6Q9NWW5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CLN6Q9NWW5 RNU6-212P-201ENST00000362642 104 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 RNU6-529P-201ENST00000363383 104 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 RNU6-546P-201ENST00000383991 107 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 RNU6-622P-201ENST00000384272 103 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 RN7SKP223-201ENST00000410582 62 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CLN6Q9NWW5 Z98742.3-201ENST00000418637 326 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 AC244636.1-201ENST00000421152 228 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 AC007283.2-201ENST00000424739 197 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.61□□□□□ -2.15
CLN6Q9NWW5 MTCYBP39-201ENST00000437562 491 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CLN6Q9NWW5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.61□□□□□ -2.15
CLN6Q9NWW5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.61□□□□□ -2.15
CLN6Q9NWW5 AL121594.1-201ENST00000475906 575 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.61□□□□□ -2.15
CLN6Q9NWW5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
CLN6Q9NWW5 Y_RNA.687-201ENST00000516558 91 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 HSPE1P18-201ENST00000517602 280 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 DUXAP5-201ENST00000529668 529 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.61□□□□□ -2.15
CLN6Q9NWW5 ELOCP32-201ENST00000548625 324 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 AL031775.1-201ENST00000607014 887 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 AP000240.1-201ENST00000609910 452 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 IGHVIII-44-202ENST00000636235 289 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 AC007671.2-201ENST00000637344 619 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CLN6Q9NWW5 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.61□□□□□ -2.15
CLN6Q9NWW5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CLN6Q9NWW5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.6□□□□□ -2.15
CLN6Q9NWW5 RNU5F-7P-201ENST00000363696 115 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 RNU6-1210P-201ENST00000363775 107 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 RNU6-39P-201ENST00000384344 107 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 MIR29C-201ENST00000385231 88 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CLN6Q9NWW5 Y_RNA.608-201ENST00000410647 95 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC114491.1-201ENST00000416095 246 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 ELOCP4-201ENST00000420090 333 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 RPL31P63-201ENST00000422565 375 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms