Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 RPS29P15-201ENST00000458329 171 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 AC140059.1-201ENST00000489238 361 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 Y_RNA.688-201ENST00000516565 95 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 SNORA43.2-201ENST00000516652 128 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 RNA5SP503-201ENST00000517047 117 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 RPL7P20-201ENST00000520308 745 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 AL391840.1-201ENST00000571144 367 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 LRRC37A5P-203ENST00000580181 585 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 MIR6895-201ENST00000613497 78 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 AC245884.12-201ENST00000615364 59 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 RMST_7.1-201ENST00000621935 268 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 ZNF271P-202ENST00000465539 1970 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 Y_RNA.553-201ENST00000384670 102 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 RNU6-606P-201ENST00000384721 111 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 MIR518C-201ENST00000384822 101 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 RNU2-63P-201ENST00000410792 194 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 RNU4-46P-201ENST00000410818 138 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 CYCSP33-201ENST00000414485 327 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 UBE2V1P10-201ENST00000414685 269 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 AC138623.1-201ENST00000418060 216 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 TOMM20P4-201ENST00000427861 435 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 AL358934.1-201ENST00000432346 324 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 AC108938.1-201ENST00000451204 136 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 AC012308.1-201ENST00000451232 178 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 AC006026.2-201ENST00000457376 180 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 AP001025.1-201ENST00000486139 332 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 SNORA31.23-201ENST00000517219 133 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 AC109329.1-201ENST00000518744 317 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 AP000873.5-201ENST00000533906 236 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 BNIP3P6-201ENST00000549284 499 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 PSMA3P-201ENST00000555485 635 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 AL713866.2-201ENST00000603579 219 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 AC008945.2-201ENST00000606056 604 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 SNORD14A-201ENST00000606526 91 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 U4atac.1-201ENST00000618345 95 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 uc_338.11-201ENST00000619132 160 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 AC026585.1-201ENST00000619582 524 ntBASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ZCCHC3Q9NUD5 SNORD114-30-201ENST00000364448 72 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 RNU6-715P-201ENST00000365204 103 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 MIR144-201ENST00000384886 86 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AL359511.1-201ENST00000402970 211 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 BTF3P7-201ENST00000407097 488 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 RNU6-1140P-201ENST00000410517 106 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AL669831.1-202ENST00000428504 417 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AL365400.1-201ENST00000431854 640 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 GTF2IP13-201ENST00000438487 386 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AC074344.1-201ENST00000512823 224 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AL356057.1-201ENST00000533798 831 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AC009127.3-201ENST00000570531 403 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 MIR4703-201ENST00000577728 79 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AC090897.2-201ENST00000581715 130 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AC119751.7-201ENST00000600494 245 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AC073410.2-201ENST00000603240 332 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AC007621.1-201ENST00000604544 437 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 MIR6817-201ENST00000615588 66 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AP003400.5-201ENST00000624827 617 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 MIR203B-201ENST00000636080 86 ntBASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.26□□□□□ -2.05
ZCCHC3Q9NUD5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 AC069528.2-201ENST00000624849 1991 ntBASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 RNA5SP68-201ENST00000363885 119 ntBASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 RNU1-57P-201ENST00000384491 166 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms