Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC6A13Q9NSD5 AF235103.2-201ENST00000525753 346 ntBASIC2.83□□□□□ -1.96
SLC6A13Q9NSD5 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC6A13Q9NSD5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SLC6A13Q9NSD5 AL133241.1-201ENST00000556832 487 ntBASIC2.83□□□□□ -1.96
SLC6A13Q9NSD5 RPL23AP78-201ENST00000599928 470 ntBASIC2.83□□□□□ -1.96
SLC6A13Q9NSD5 AC123912.5-201ENST00000605470 343 ntBASIC2.83□□□□□ -1.96
SLC6A13Q9NSD5 RMST_7.1-201ENST00000621935 268 ntBASIC2.83□□□□□ -1.96
SLC6A13Q9NSD5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.83□□□□□ -1.96
SLC6A13Q9NSD5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.83□□□□□ -1.96
SLC6A13Q9NSD5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SLC6A13Q9NSD5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SLC6A13Q9NSD5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.83□□□□□ -1.96
SLC6A13Q9NSD5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-37P-201ENST00000362692 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-78P-201ENST00000362897 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-11P-201ENST00000364234 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-7-201ENST00000364784 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU5E-7P-201ENST00000365290 117 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-1283P-201ENST00000365314 105 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-8-201ENST00000365467 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 Y_RNA.373-201ENST00000365600 103 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-25P-201ENST00000383873 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-1-201ENST00000383898 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-48P-201ENST00000384161 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-36P-201ENST00000384172 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-4P-201ENST00000384205 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-5P-201ENST00000384238 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-3P-201ENST00000384314 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-16P-201ENST00000384385 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-15P-201ENST00000384534 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 Y_RNA.530-201ENST00000384587 101 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-2-201ENST00000384627 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-29P-201ENST00000384637 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-9-201ENST00000384776 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-33P-201ENST00000384793 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 SNORA26.7-201ENST00000391288 122 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNA5SP120-201ENST00000410900 112 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 MTND1P23-201ENST00000416931 372 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 USP9YP20-201ENST00000419224 558 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RPL30P16-201ENST00000419341 429 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 MTCO3P18-201ENST00000440206 761 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RPL23AP58-201ENST00000440453 469 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 AC007547.1-201ENST00000462177 490 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 GZMAP1-201ENST00000503054 631 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 SEM1P1-201ENST00000506694 209 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 MIR4801-201ENST00000582704 82 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 AC024153.1-201ENST00000603103 365 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 AP000787.2-201ENST00000604432 568 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-6P-201ENST00000606623 107 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 AC100810.6-201ENST00000638068 285 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 MIR622-201ENST00000638396 96 ntBASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SLC6A13Q9NSD5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 MIR147B-201ENST00000390185 80 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 RPL21P75-201ENST00000396599 483 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AL512633.1-201ENST00000399931 655 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 RPL21P28-201ENST00000401418 483 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 Z92545.1-201ENST00000411782 234 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AL139413.1-201ENST00000421309 217 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AL365400.1-201ENST00000431854 640 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 HMGB1P31-201ENST00000437242 427 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AL441985.1-201ENST00000457727 251 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 RPL21P39-201ENST00000463605 483 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 RN7SL807P-201ENST00000470923 297 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AC107626.1-201ENST00000471084 183 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AP000852.1-201ENST00000472460 573 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AC117440.1-201ENST00000474107 571 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AC087190.1-201ENST00000484462 480 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AC093591.1-201ENST00000491435 481 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 RPL21P16-201ENST00000495531 483 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 FAM206BP-201ENST00000510179 541 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 SNORA43.2-201ENST00000516652 128 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 RN7SKP57-201ENST00000517248 293 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AC090136.1-201ENST00000520009 240 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AP000763.2-201ENST00000540641 163 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 CR383656.8-201ENST00000549046 145 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AC009163.5-201ENST00000575421 637 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 MIR5692C1-201ENST00000585309 91 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AL670379.10-201ENST00000604330 253 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AL670379.9-201ENST00000605428 253 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-85P-201ENST00000605989 107 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms