Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VTA1Q9NP79 AC013470.1-201ENST00000453438 462 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU7-152P-201ENST00000458982 64 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 MTND4P17-201ENST00000470444 350 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 AP002884.2-201ENST00000471647 395 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 AC114801.2-201ENST00000503825 781 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 Y_RNA.718-201ENST00000517110 102 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.76□□□□□ -1.81
VTA1Q9NP79 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.76□□□□□ -1.81
VTA1Q9NP79 AL162713.1-201ENST00000604480 262 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-6P-201ENST00000606623 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 AL133215.3-201ENST00000609801 448 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 AC004852.3-201ENST00000614131 326 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 MIR6128-201ENST00000615528 109 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VTA1Q9NP79 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.75□□□□□ -1.81
VTA1Q9NP79 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VTA1Q9NP79 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VTA1Q9NP79 RNU5E-7P-201ENST00000365290 117 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 RNY4P36-201ENST00000391116 96 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 MIR1302-11-201ENST00000408051 138 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 MIR1302-9-201ENST00000408365 138 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 MIR1302-10-201ENST00000408734 138 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 RNU6-1077P-201ENST00000410506 102 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.75□□□□□ -1.81
VTA1Q9NP79 DAP3P1-201ENST00000441522 278 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 RPL23AP45-201ENST00000476406 468 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.75□□□□□ -1.81
VTA1Q9NP79 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.75□□□□□ -1.81
VTA1Q9NP79 RPS27AP10-201ENST00000496103 208 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.75□□□□□ -1.81
VTA1Q9NP79 SNORA31.1-201ENST00000515993 133 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 SNORA31.5-201ENST00000516190 133 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 Y_RNA.701-201ENST00000516812 110 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 Y_RNA.708-201ENST00000516950 96 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VTA1Q9NP79 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.75□□□□□ -1.81
VTA1Q9NP79 AC010186.2-204ENST00000537668 439 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 AL391261.3-201ENST00000557194 520 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 MIR4474-201ENST00000579189 78 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.75□□□□□ -1.81
VTA1Q9NP79 AC124303.1-201ENST00000605703 360 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 MIR1302-2-201ENST00000607096 138 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.75□□□□□ -1.81
VTA1Q9NP79 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.75□□□□□ -1.81
VTA1Q9NP79 AL161629.2-201ENST00000615347 275 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.75□□□□□ -1.81
VTA1Q9NP79 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VTA1Q9NP79 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
VTA1Q9NP79 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.75□□□□□ -1.81
VTA1Q9NP79 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
VTA1Q9NP79 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
VTA1Q9NP79 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VTA1Q9NP79 CDC27P3-201ENST00000635418 1910 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VTA1Q9NP79 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.74□□□□□ -1.81
VTA1Q9NP79 UBA52P6-201ENST00000399822 382 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 RNU6-370P-201ENST00000411008 104 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 AL030996.1-201ENST00000411430 235 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 SETP5-201ENST00000437270 562 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 HIGD1AP11-201ENST00000438361 280 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.74□□□□□ -1.81
VTA1Q9NP79 SNORD5.1-201ENST00000458800 75 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 Y_RNA.653-201ENST00000459091 95 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 SNORA59A-201ENST00000459326 152 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 RNU7-23P-201ENST00000459465 62 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 U8.21-201ENST00000459536 136 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 RPL23AP67-201ENST00000465341 474 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 S100A11P2-201ENST00000467589 312 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 RNU6-377P-201ENST00000515965 102 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 RNU6-307P-201ENST00000516743 106 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.74□□□□□ -1.81
VTA1Q9NP79 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.74□□□□□ -1.81
VTA1Q9NP79 AC024153.1-201ENST00000603103 365 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 AC018889.1-201ENST00000605372 397 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 AL161423.1-201ENST00000613700 262 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 PISRT1.1-201ENST00000616930 107 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.74□□□□□ -1.81
VTA1Q9NP79 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VTA1Q9NP79 U4.7-201ENST00000638126 106 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 AC073073.2-201ENST00000609827 2578 ntBASIC3.74□□□□□ -1.81
VTA1Q9NP79 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VTA1Q9NP79 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.74□□□□□ -1.81
VTA1Q9NP79 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
VTA1Q9NP79 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
VTA1Q9NP79 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 AC006504.1-201ENST00000562493 3666 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
VTA1Q9NP79 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.73□□□□□ -1.81
VTA1Q9NP79 AL513302.2-201ENST00000562313 1842 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
VTA1Q9NP79 RNU6-1188P-201ENST00000363795 107 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 RNU6-596P-201ENST00000365395 98 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
VTA1Q9NP79 Z98749.2-208ENST00000381646 500 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 RNU6-933P-201ENST00000384424 107 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 MIR518D-201ENST00000385014 87 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 RNA5SP38-201ENST00000410750 119 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.73□□□□□ -1.81
VTA1Q9NP79 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms