Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RNU6-831P-201ENST00000384548 107 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 UBA52P6-201ENST00000399822 382 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDH9Q9HC56 IFNA20P-201ENST00000436840 528 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDH9Q9HC56 UBBP3-201ENST00000445497 241 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AL590664.1-201ENST00000448065 339 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AP000852.1-201ENST00000472460 573 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AC103975.1-201ENST00000482506 483 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDH9Q9HC56 FAM206BP-201ENST00000510179 541 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDH9Q9HC56 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.89□□□□□ -1.95
PCDH9Q9HC56 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AC009902.1-201ENST00000519351 183 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDH9Q9HC56 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AC026464.5-201ENST00000562497 722 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AL451007.1-201ENST00000595491 289 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 BNIP3P25-201ENST00000596023 559 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 NUTF2P8-201ENST00000604593 363 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 HSPE1P7-201ENST00000604681 321 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AC002044.1-201ENST00000606707 158 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AC005046.1-201ENST00000608515 625 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 FTX_3.1-201ENST00000610451 147 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 AC022306.2-201ENST00000617563 647 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PCDH9Q9HC56 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDH9Q9HC56 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PCDH9Q9HC56 Y_RNA.167-201ENST00000363735 109 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 RNU6-884P-201ENST00000363889 107 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 Y_RNA.399-201ENST00000383955 105 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 RNU6-1009P-201ENST00000390996 107 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 RNU6-510P-201ENST00000391239 108 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDH9Q9HC56 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDH9Q9HC56 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDH9Q9HC56 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDH9Q9HC56 AL583843.1-201ENST00000456070 346 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 PPP1R2P5-201ENST00000457256 603 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 AC008716.1-201ENST00000511084 513 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 AC114781.4-201ENST00000513707 639 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 SCARNA13-201ENST00000516672 275 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 RNU6-572P-201ENST00000516724 80 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 RNU7-30P-201ENST00000516835 62 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 SNORA31.19-201ENST00000517079 126 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 RN7SKP256-201ENST00000517201 314 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.88□□□□□ -1.95
PCDH9Q9HC56 AC090136.1-201ENST00000520009 240 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDH9Q9HC56 MTCO3P13-201ENST00000577757 781 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 MTND4LP5-201ENST00000605152 292 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 AC103705.1-201ENST00000619013 241 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 AL031601.2-202ENST00000622650 282 ntBASIC2.88□□□□□ -1.95
PCDH9Q9HC56 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDH9Q9HC56 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PCDH9Q9HC56 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDH9Q9HC56 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
PCDH9Q9HC56 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AC009487.2-201ENST00000420969 6821 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.87□□□□□ -1.95
PCDH9Q9HC56 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDH9Q9HC56 RNU6-270P-201ENST00000364131 105 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 SNORD56.5-201ENST00000364281 72 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 RNA5SP139-201ENST00000364340 117 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 Y_RNA.530-201ENST00000384587 101 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 SNORA1.3-201ENST00000384676 136 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PCDH9Q9HC56 RNA5SP252-201ENST00000391131 119 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 EIF4E2P1-201ENST00000393781 255 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AL512633.1-201ENST00000399931 655 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AL356057.2-201ENST00000403318 432 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 RPLP0P7-201ENST00000416050 667 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AC099548.1-201ENST00000421443 426 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 PGBD4P6-201ENST00000421501 610 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AC093019.1-201ENST00000443135 252 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 MRPL50P4-201ENST00000446432 475 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 snoU13.28-201ENST00000459235 104 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AC087884.1-201ENST00000469738 328 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDH9Q9HC56 SNORA19.2-201ENST00000516013 114 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 RNU1-86P-201ENST00000516108 154 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 RNU1-103P-201ENST00000516502 125 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 RNU1-107P-201ENST00000516617 154 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AC087241.2-201ENST00000535801 324 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AC090115.3-201ENST00000553218 849 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 SCOCP1-201ENST00000554676 349 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AC005668.1-201ENST00000571142 476 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 MIR3609-201ENST00000582661 80 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AC091135.1-201ENST00000585943 307 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 ZNF861P-201ENST00000588126 639 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AC005498.1-201ENST00000592125 465 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AC024153.1-201ENST00000603103 365 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 LARP7P1-201ENST00000605576 316 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms