Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC012005.1-201ENST00000624575 75 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 AC090517.3-201ENST00000625170 141 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 AL365361.1-201ENST00000566942 3481 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 Y_RNA.22-201ENST00000362492 102 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-179P-201ENST00000363350 107 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 RNU5F-7P-201ENST00000363696 115 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 RNY1P12-201ENST00000364251 105 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 SNORA8-201ENST00000384574 139 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 RN7SKP284-201ENST00000411002 343 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 SRIP3-201ENST00000413200 219 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC114491.1-201ENST00000416095 246 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC074117.2-201ENST00000417130 397 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC244636.1-201ENST00000421152 228 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC108938.1-201ENST00000451204 136 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 RPL23AP49-201ENST00000492925 468 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 SCARNA16.3-201ENST00000516595 184 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC022616.3-201ENST00000523940 148 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AP003392.2-201ENST00000527269 208 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 OR5AL2P-201ENST00000532185 920 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 LARP7P3-201ENST00000579888 337 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC008521.1-201ENST00000587471 187 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AL033523.1-201ENST00000605153 153 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC024933.1-201ENST00000608472 348 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AC012360.2-201ENST00000609349 391 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AL773524.1-201ENST00000614065 229 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 AL359314.1-201ENST00000616913 261 ntBASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
SND1-IT1Q9HBX3 RNA5SP276-201ENST00000362580 94 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-212P-201ENST00000362642 104 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 Y_RNA.40-201ENST00000362645 93 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-61P-201ENST00000365528 109 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 SNORD14D-201ENST00000384390 87 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 MIR676-201ENST00000390702 67 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 NDUFB4P4-201ENST00000404822 243 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 MIR1283-2-201ENST00000408621 87 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 HIGD1AP15-201ENST00000416198 280 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 Z99497.1-201ENST00000421282 135 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 RPL23AP6-201ENST00000446637 472 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 ZNF114P1-201ENST00000453500 292 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 SLC25A15P5-201ENST00000508033 253 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AC005178.1-201ENST00000508392 440 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AP005639.2-201ENST00000527592 928 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 RPL21P5-201ENST00000554662 472 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AC022022.2-201ENST00000602989 360 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AL136363.2-201ENST00000604173 851 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 ZNF658B-202ENST00000615961 3375 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AC027807.2-201ENST00000616099 408 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AL132822.1-201ENST00000617063 513 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AL159153.1-201ENST00000619688 317 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AC025034.2-201ENST00000623264 286 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AC019226.2-201ENST00000625973 424 ntBASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.36□□□□□ -2.19
SND1-IT1Q9HBX3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 SNORA72.3-201ENST00000365074 132 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AL356432.1-201ENST00000405809 419 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 SNORA11.4-201ENST00000408823 129 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 BTF3L4P1-201ENST00000413813 468 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AC009963.1-201ENST00000417265 157 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 EIF4EP2-201ENST00000422816 654 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 HMGN2P19-201ENST00000425149 265 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AL593851.1-201ENST00000426171 157 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AL356583.2-201ENST00000426536 280 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 333.3 ms