Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 HIGD1AP1-201ENST00000550979 275 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 IMMP1LP2-201ENST00000552954 492 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 AC007151.1-201ENST00000572774 483 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 AC100830.2-201ENST00000581636 240 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 AC068831.7-201ENST00000616954 363 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 AC007256.1-201ENST00000392253 2765 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 AC008264.2-201ENST00000610193 3731 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
USP29Q9HBJ7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.29□□□□□ -1.88
USP29Q9HBJ7 FTLP6-201ENST00000355274 422 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 RNU6-562P-201ENST00000362731 107 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.29□□□□□ -1.88
USP29Q9HBJ7 XGY1-201ENST00000381172 446 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 RNU6-140P-201ENST00000384566 108 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 MIR591-201ENST00000385290 95 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 RNU2-68P-201ENST00000410878 191 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.29□□□□□ -1.88
USP29Q9HBJ7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.29□□□□□ -1.88
USP29Q9HBJ7 AL590632.1-201ENST00000424289 371 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 HMGB1P9-201ENST00000429856 646 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 SNAP23P1-201ENST00000433229 246 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 AL512844.2-201ENST00000433990 593 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 Y_RNA.635-201ENST00000459041 101 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.29□□□□□ -1.88
USP29Q9HBJ7 RNU6-559P-201ENST00000516151 98 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 AC025423.5-201ENST00000550230 219 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 HMGB1P14-201ENST00000557424 591 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 ANP32BP3-201ENST00000559213 706 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.29□□□□□ -1.88
USP29Q9HBJ7 FTX_3.1-201ENST00000610451 147 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 AL157817.1-201ENST00000614264 790 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 AC007742.2-201ENST00000618226 398 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 PLCE1P1-201ENST00000622094 305 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 AC027309.3-201ENST00000623419 351 ntBASIC3.29□□□□□ -1.88
USP29Q9HBJ7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.29□□□□□ -1.88
USP29Q9HBJ7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
USP29Q9HBJ7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
USP29Q9HBJ7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
USP29Q9HBJ7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
USP29Q9HBJ7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
USP29Q9HBJ7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
USP29Q9HBJ7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
USP29Q9HBJ7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
USP29Q9HBJ7 U3.6-201ENST00000363622 211 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 SNORD14B-201ENST00000364533 90 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 Y_RNA.259-201ENST00000364619 101 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 RNU6-166P-201ENST00000384371 107 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 UBA52P6-201ENST00000399822 382 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 Y_RNA.623-201ENST00000411128 95 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 RPL37P10-201ENST00000412884 288 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.28□□□□□ -1.88
USP29Q9HBJ7 AL354751.2-201ENST00000415471 210 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.28□□□□□ -1.88
USP29Q9HBJ7 BRK1P2-201ENST00000442875 223 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.28□□□□□ -1.88
USP29Q9HBJ7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.28□□□□□ -1.88
USP29Q9HBJ7 AC109925.1-201ENST00000478069 331 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 RPS27P27-201ENST00000498779 255 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 AC092436.3-201ENST00000511788 257 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 Y_RNA.718-201ENST00000517110 102 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 APOOP3-201ENST00000536787 586 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.28□□□□□ -1.88
USP29Q9HBJ7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.28□□□□□ -1.88
USP29Q9HBJ7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.28□□□□□ -1.88
USP29Q9HBJ7 AC008962.1-201ENST00000605729 304 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 AC099506.2-201ENST00000623074 221 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 U2.21-201ENST00000637295 81 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 MAPK10-362ENST00000641864 4484 ntBASIC3.28□□□□□ -1.88
USP29Q9HBJ7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.28□□□□□ -1.88
USP29Q9HBJ7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
USP29Q9HBJ7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
USP29Q9HBJ7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.27□□□□□ -1.89
USP29Q9HBJ7 AL353743.1-202ENST00000431724 1695 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.27□□□□□ -1.89
USP29Q9HBJ7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.27□□□□□ -1.89
USP29Q9HBJ7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
USP29Q9HBJ7 Y_RNA.431-201ENST00000384086 102 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 RNU6-1297P-201ENST00000384415 104 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 RNU6-95P-201ENST00000384697 107 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
USP29Q9HBJ7 U3.26-201ENST00000391236 204 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 RPL21P3-201ENST00000395517 478 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 RNU6-1077P-201ENST00000410506 102 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 ATG3P1-201ENST00000419507 911 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 AL139396.1-201ENST00000421137 167 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.27□□□□□ -1.89
USP29Q9HBJ7 AC236972.2-201ENST00000434979 310 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.27□□□□□ -1.89
USP29Q9HBJ7 RPS12P18-201ENST00000442381 270 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 RPL12P25-201ENST00000455592 494 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 AL583843.1-201ENST00000456070 346 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 AC146507.2-201ENST00000460608 476 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 RN7SL504P-201ENST00000494496 287 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms