Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 CYCSP33-201ENST00000414485 327 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 NUP35P1-201ENST00000422734 947 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 OOSP1P1-201ENST00000423265 274 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 UBE2V1P8-201ENST00000437166 265 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 HIGD1AP2-201ENST00000446367 280 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AC092001.1-201ENST00000453012 261 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AC233279.1-201ENST00000455300 423 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 SCGB1D5P-201ENST00000515134 247 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AP003033.1-201ENST00000527244 415 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AC107016.2-201ENST00000547968 190 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 BNIP3P6-201ENST00000549284 499 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AC138761.3-201ENST00000579993 334 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 NRBF2P5-201ENST00000603087 788 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 ATP1B3P1-201ENST00000605365 821 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AC107871.2-201ENST00000612894 502 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 uc_338.14-201ENST00000613162 166 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 MIR6715A-201ENST00000615929 79 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AP003400.5-201ENST00000624827 617 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 AC138915.1-201ENST00000565427 1685 ntBASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.88□□□□□ -1.95
POLR1BQ9H9Y6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 RNY3P3-201ENST00000363816 102 ntBASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 RNU4-12P-201ENST00000365233 139 ntBASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 MIR887-201ENST00000401258 79 ntBASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 RNA5SP274-201ENST00000410484 108 ntBASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 RPL7P37-201ENST00000425095 738 ntBASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 MTND1P4-201ENST00000435196 415 ntBASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 CALM1P1-201ENST00000442082 433 ntBASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 RPL39P40-201ENST00000445481 146 ntBASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 GSTA11P-201ENST00000452866 669 ntBASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 RN7SKP132-201ENST00000516001 208 ntBASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 RNU6-581P-201ENST00000516214 105 ntBASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 AC023043.3-201ENST00000593113 385 ntBASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 AC005261.5-201ENST00000596280 355 ntBASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.87□□□□□ -1.95
POLR1BQ9H9Y6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 AC004520.1-201ENST00000608362 1413 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 AC062016.1-201ENST00000355719 319 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 RNU4-82P-201ENST00000362443 140 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 Y_RNA.324-201ENST00000365165 102 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 RNU6-1083P-201ENST00000384022 107 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 RNU6-38P-201ENST00000384085 107 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 Y_RNA.599-201ENST00000410489 109 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 Y_RNA.619-201ENST00000410951 90 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 AC016831.2-201ENST00000417179 352 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 RPL7P10-201ENST00000417407 739 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 RPS3AP44-201ENST00000425466 790 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 AC063976.3-201ENST00000426849 329 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 RNU6-333P-201ENST00000459117 107 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 MTCO3P38-201ENST00000468910 766 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 AC117440.1-201ENST00000474107 571 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 RN7SL633P-201ENST00000488974 297 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 GZMAP1-201ENST00000503054 631 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 HIGD1AP13-201ENST00000509878 289 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 MRPS36P2-201ENST00000512569 299 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 RNU5F-8P-201ENST00000515941 111 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 ACA59.2-201ENST00000517061 156 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 AC069113.1-201ENST00000517763 267 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 CYCSP27-201ENST00000527643 293 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 GLYCAM1-201ENST00000546596 285 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 OR11H5P-201ENST00000554039 926 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 RNU6-91P-201ENST00000607774 107 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms