Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 MTCO2P19-201ENST00000427513 598 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 RPL7P54-201ENST00000438336 674 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 BTF3P15-201ENST00000455606 336 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 MTND2P33-201ENST00000506452 1031 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 RPL37P25-201ENST00000507308 276 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 AC098591.2-201ENST00000510152 315 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 RNU6-506P-201ENST00000516553 94 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 RNU6-1178P-201ENST00000516674 107 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 RPL23AP78-201ENST00000599928 470 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 AP000942.3-201ENST00000603702 160 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 AC005609.4-201ENST00000625071 447 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 AC010680.1-201ENST00000590024 3590 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 MAPK10-322ENST00000641485 4530 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AC092881.1-201ENST00000638218 2733 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AC002543.1-201ENST00000299783 1954 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 RNU6-550P-201ENST00000391057 101 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 SNORD88.1-201ENST00000408684 91 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 RNU2-29P-201ENST00000410423 189 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 RNU6-193P-201ENST00000410977 107 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AC009296.1-201ENST00000443146 155 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AL078601.1-201ENST00000444542 271 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AC003071.1-201ENST00000451219 789 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 SNRPFP3-201ENST00000457792 225 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 RPL23AP42-201ENST00000471152 471 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 RNU6-1183P-201ENST00000517054 60 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 RNU6-685P-201ENST00000517088 95 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AC022634.1-201ENST00000520765 532 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AC008752.3-201ENST00000588113 712 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AC008739.2-201ENST00000597006 317 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.82□□□□□ -1.96
ZNF541Q9H0D2 AC008669.1-201ENST00000565823 2178 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 RNU6-1280P-201ENST00000365211 107 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 RNU6-996P-201ENST00000365438 107 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 SNORD21-201ENST00000383953 95 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 RNA5SP213-201ENST00000391031 106 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 AL023284.1-201ENST00000403956 276 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 RNU4-46P-201ENST00000410818 138 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 AC009414.1-201ENST00000427200 443 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 AL606489.2-201ENST00000433886 234 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 MTND1P34-201ENST00000438556 671 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 RPL21P2-201ENST00000440049 481 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 AL583843.1-201ENST00000456070 346 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 SCARNA17.1-201ENST00000516211 143 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 SCARNA17.2-201ENST00000516334 143 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 RNU6-703P-201ENST00000516946 107 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 AC009902.1-201ENST00000519351 183 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 AP001893.2-201ENST00000526949 202 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 AP003034.1-201ENST00000534621 422 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 SNRPGP18-201ENST00000553000 214 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 MIR4703-201ENST00000577728 79 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 MTATP6P3-201ENST00000581686 676 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 AP001596.2-201ENST00000608410 312 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 SCARNA17.4-201ENST00000614296 143 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 U2.21-201ENST00000637295 81 ntBASIC2.81□□□□□ -1.96
ZNF541Q9H0D2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 Y_RNA.3-201ENST00000362331 103 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 U8.9-201ENST00000365667 134 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 RNU6-1215P-201ENST00000384441 102 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 SNORA80E-201ENST00000384744 137 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AL590002.1-201ENST00000406554 418 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 MTCYBP8-201ENST00000422855 651 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AL358075.3-201ENST00000426289 226 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AL365496.1-201ENST00000426885 215 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 TIMM9P3-201ENST00000428659 274 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms