Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC022616.3-201ENST00000523940 148 ntBASIC2.09□□□□□ -2.07
POLR1EQ9GZS1 AC002984.1-201ENST00000591692 448 ntBASIC2.09□□□□□ -2.07
POLR1EQ9GZS1 BNIP3P30-201ENST00000601184 574 ntBASIC2.09□□□□□ -2.07
POLR1EQ9GZS1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.09□□□□□ -2.07
POLR1EQ9GZS1 AC126118.1-201ENST00000607744 628 ntBASIC2.09□□□□□ -2.07
POLR1EQ9GZS1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.09□□□□□ -2.07
POLR1EQ9GZS1 SDR42E1P4-201ENST00000620894 481 ntBASIC2.09□□□□□ -2.07
POLR1EQ9GZS1 RBBP8P1-201ENST00000449447 1844 ntBASIC2.09□□□□□ -2.08
POLR1EQ9GZS1 KPNA2P1-201ENST00000458289 1591 ntBASIC2.09□□□□□ -2.08
POLR1EQ9GZS1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
POLR1EQ9GZS1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 CKAP2P1-201ENST00000555477 2049 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 MIR412-201ENST00000362142 91 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 Y_RNA.22-201ENST00000362492 102 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 RNU4-21P-201ENST00000362802 126 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 U8.3-201ENST00000363321 132 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 RNU6-1032P-201ENST00000384100 107 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 SNORA70B-201ENST00000384210 135 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 RNU1-57P-201ENST00000384491 166 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 Y_RNA.623-201ENST00000411128 95 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 ELOCP4-201ENST00000420090 333 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 AC104850.1-201ENST00000435940 476 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 MTND6P13-201ENST00000443510 523 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 RPL7P43-201ENST00000478876 753 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 MTAPP1-201ENST00000489154 819 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 HMGB1P30-201ENST00000492455 606 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 IGKV3-31-201ENST00000523109 329 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 ADI1P3-201ENST00000549509 470 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 AC136619.2-201ENST00000563361 631 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 AC026271.5-201ENST00000577873 130 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 MIR4648-201ENST00000580107 72 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 AC005771.1-201ENST00000585581 349 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 NDUFA8P1-201ENST00000605525 367 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 AC012360.2-201ENST00000609349 391 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 AC022202.1-201ENST00000613515 211 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 U6.42-201ENST00000618440 107 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 AL603839.4-201ENST00000624658 1005 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
POLR1EQ9GZS1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 RNU6-1159P-201ENST00000362933 107 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 Y_RNA.169-201ENST00000363745 96 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 SNORA67.3-201ENST00000384366 140 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 SNORA24.1-201ENST00000384401 135 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 MIR558-201ENST00000384920 94 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 SNORA46.1-201ENST00000391069 153 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 RPS3AP36-201ENST00000398190 775 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 HMGB3P2-201ENST00000411913 584 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 AL356379.1-201ENST00000414105 126 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 UBE2V1P10-201ENST00000414685 269 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 AL031779.1-201ENST00000415663 330 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 RPL32P28-201ENST00000443577 397 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 AL021397.1-201ENST00000451806 248 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 PMCHL2-203ENST00000457791 237 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 AC010486.2-201ENST00000505572 483 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 RNU1-40P-201ENST00000516816 164 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 RNU1-97P-201ENST00000516872 164 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 RNU6-586P-201ENST00000517265 104 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 AC060788.1-201ENST00000521318 469 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 AP004607.1-201ENST00000524456 203 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 AC009314.1-201ENST00000603871 304 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 APOOP1-201ENST00000604695 592 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 AC021646.1-201ENST00000605469 484 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 AC098657.3-201ENST00000620434 263 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 AC103710.2-202ENST00000641454 2853 ntBASIC2.07□□□□□ -2.08
POLR1EQ9GZS1 SNORD3E-201ENST00000362899 217 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 RNU5A-2P-201ENST00000384337 116 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 HMGN2P39-201ENST00000398005 273 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AL591034.2-201ENST00000402839 359 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 RPS3AP3-201ENST00000411933 242 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AL139156.1-201ENST00000412785 841 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AL627311.1-201ENST00000431514 115 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AL445646.1-201ENST00000431784 216 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 DNAJC19P4-201ENST00000440115 345 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 snoU109.2-201ENST00000459316 135 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AC108078.2-201ENST00000510750 236 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 RNU2-53P-201ENST00000516257 147 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 HSPE1P18-201ENST00000517602 280 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AC034114.1-201ENST00000520293 285 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms