Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL589994.2-201ENST00000621124 579 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SALL3Q9BXA9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.66□□□□□ -1.82
SALL3Q9BXA9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.66□□□□□ -1.82
SALL3Q9BXA9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.66□□□□□ -1.82
SALL3Q9BXA9 RNU6-701P-201ENST00000384059 107 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 MT-TG-201ENST00000387429 68 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 SNORA48.5-201ENST00000391143 135 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 CISD1P1-201ENST00000393907 327 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 NDUFS5P1-201ENST00000405668 289 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 U3.42-201ENST00000408746 214 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SALL3Q9BXA9 RNA5SP129-201ENST00000410276 118 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 Y_RNA.605-201ENST00000410577 105 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.66□□□□□ -1.82
SALL3Q9BXA9 AL669831.1-202ENST00000428504 417 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.66□□□□□ -1.82
SALL3Q9BXA9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SALL3Q9BXA9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.66□□□□□ -1.82
SALL3Q9BXA9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.66□□□□□ -1.82
SALL3Q9BXA9 RPL31P60-201ENST00000478450 367 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 Y_RNA.708-201ENST00000516950 96 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.66□□□□□ -1.82
SALL3Q9BXA9 RPL23AP84-201ENST00000571193 464 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.66□□□□□ -1.82
SALL3Q9BXA9 VN1R107P-201ENST00000601784 209 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 PISRT1.1-201ENST00000616930 107 ntBASIC3.66□□□□□ -1.82
SALL3Q9BXA9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.66□□□□□ -1.82
SALL3Q9BXA9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SALL3Q9BXA9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SALL3Q9BXA9 AC116096.1-201ENST00000566804 2314 ntBASIC3.65□□□□□ -1.82
SALL3Q9BXA9 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 MTND5P30-201ENST00000452896 1731 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 AP001148.1-201ENST00000624124 2359 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 Y_RNA.80-201ENST00000362996 102 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 RNU6-1155P-201ENST00000363554 107 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 SNORA23-201ENST00000365128 182 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 Y_RNA.463-201ENST00000384271 102 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 MIR135A2-201ENST00000384854 100 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 SNORA75.6-201ENST00000391318 127 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 RN7SKP284-201ENST00000411002 343 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.65□□□□□ -1.83
SALL3Q9BXA9 AC099677.1-201ENST00000420575 175 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.65□□□□□ -1.83
SALL3Q9BXA9 AC090774.1-201ENST00000435925 246 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.65□□□□□ -1.83
SALL3Q9BXA9 UBE2DNL-203ENST00000474922 222 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 RN7SL633P-201ENST00000488974 297 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 AC015911.1-201ENST00000495111 156 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 AC026801.1-201ENST00000497178 464 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
SALL3Q9BXA9 AC026801.2-201ENST00000515352 425 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.65□□□□□ -1.83
SALL3Q9BXA9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.65□□□□□ -1.83
SALL3Q9BXA9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.65□□□□□ -1.83
SALL3Q9BXA9 MIR6128-201ENST00000615528 109 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 U4.1-201ENST00000620349 87 ntBASIC3.65□□□□□ -1.83
SALL3Q9BXA9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SALL3Q9BXA9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.64□□□□□ -1.83
SALL3Q9BXA9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SALL3Q9BXA9 AL365361.1-201ENST00000566942 3481 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.64□□□□□ -1.83
SALL3Q9BXA9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SALL3Q9BXA9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SALL3Q9BXA9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SALL3Q9BXA9 RNU6-50P-201ENST00000362356 103 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 RNU6-490P-201ENST00000362985 107 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 SNORA38.1-201ENST00000364172 131 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 RNU6-715P-201ENST00000365204 103 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.64□□□□□ -1.83
SALL3Q9BXA9 RNU6-574P-201ENST00000384265 107 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 RNU6-1050P-201ENST00000410388 107 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 PPP1R11P2-201ENST00000423543 382 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 MTCYBP10-201ENST00000424905 650 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.64□□□□□ -1.83
SALL3Q9BXA9 AL645568.3-201ENST00000433683 316 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 HIGD1AP11-201ENST00000438361 280 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.64□□□□□ -1.83
SALL3Q9BXA9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.64□□□□□ -1.83
SALL3Q9BXA9 AL121871.1-201ENST00000443413 436 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 FABP5P13-201ENST00000452144 328 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 SUMO1P2-201ENST00000452524 304 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 RPS24P6-201ENST00000452670 400 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 AP001486.1-201ENST00000463339 476 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 HMGB1P22-201ENST00000505315 124 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 RNU6-764P-201ENST00000516396 105 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 Y_RNA.689-201ENST00000516589 107 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 RNU1-54P-201ENST00000517181 120 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 AC087854.1-201ENST00000519706 414 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.64□□□□□ -1.83
SALL3Q9BXA9 MIR3186-201ENST00000577404 85 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 MIR3668-201ENST00000582138 75 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 AL109918.3-201ENST00000603072 338 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 ATP1B3P1-201ENST00000605365 821 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 AC018462.2-201ENST00000605375 395 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 AL365434.2-201ENST00000607979 234 ntBASIC3.64□□□□□ -1.83
SALL3Q9BXA9 AC090425.1-201ENST00000610007 140 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms