Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RNA5SP383-201ENST00000362934 120 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 RNU1-100P-201ENST00000365255 165 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 RNU6-1027P-201ENST00000383998 107 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 RNU6-790P-201ENST00000384479 105 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 SNORD116-20-201ENST00000384529 92 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 RNU6-19P-201ENST00000384718 107 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 MIR518D-201ENST00000385014 87 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
NPAS1Q99742 RNU6-1245P-201ENST00000411130 106 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 RNU6-293P-201ENST00000411259 106 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 RPL37P10-201ENST00000412884 288 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.02□□□□□ -1.93
NPAS1Q99742 AL590632.1-201ENST00000424289 371 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 MTND3P23-201ENST00000431980 347 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 PRSS3P4-201ENST00000453323 162 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 RNU6-1037P-201ENST00000459571 107 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 AC107626.1-201ENST00000471084 183 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 RPL7P49-201ENST00000471402 708 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 MRPL42P6-201ENST00000486397 371 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 RNU1-54P-201ENST00000517181 120 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.02□□□□□ -1.93
NPAS1Q99742 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.02□□□□□ -1.93
NPAS1Q99742 DNAJC8P1-201ENST00000554535 372 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 MIR4276-201ENST00000584832 70 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NPAS1Q99742 AC064836.2-201ENST00000609491 462 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.02□□□□□ -1.93
NPAS1Q99742 MIR6128-201ENST00000615528 109 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
NPAS1Q99742 AC112487.2-201ENST00000637950 304 ntBASIC3.02□□□□□ -1.93
NPAS1Q99742 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NPAS1Q99742 ZNF519P1-201ENST00000449011 1626 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NPAS1Q99742 RNU6-78P-201ENST00000362897 107 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 RNU6-797P-201ENST00000363101 109 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 RNU6-799P-201ENST00000363567 107 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 RNA5SP139-201ENST00000364340 117 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 MIR7-3-201ENST00000384898 110 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 FTH1P15-201ENST00000406984 280 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 RPS3AP52-201ENST00000435639 297 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 Z75741.1-201ENST00000446793 314 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 AMD1P1-201ENST00000457220 922 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 MTND4P17-201ENST00000470444 350 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 AC074250.1-201ENST00000511117 192 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 SNORA43.2-201ENST00000516652 128 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.01□□□□□ -1.93
NPAS1Q99742 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.01□□□□□ -1.93
NPAS1Q99742 AP005639.2-201ENST00000527592 928 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.01□□□□□ -1.93
NPAS1Q99742 RAB11AP2-201ENST00000545905 639 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 AC010653.1-201ENST00000571108 881 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.01□□□□□ -1.93
NPAS1Q99742 AC010378.1-201ENST00000619270 362 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.01□□□□□ -1.93
NPAS1Q99742 MIR1302-1-201ENST00000637932 143 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NPAS1Q99742 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NPAS1Q99742 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.01□□□□□ -1.93
NPAS1Q99742 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.01□□□□□ -1.93
NPAS1Q99742 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NPAS1Q99742 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3□□□□□ -1.93
NPAS1Q99742 AC010889.1-201ENST00000566193 2666 ntBASIC3□□□□□ -1.93
NPAS1Q99742 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NPAS1Q99742 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
NPAS1Q99742 RNU6-428P-201ENST00000362942 107 ntBASIC3□□□□□ -1.93
NPAS1Q99742 MIR147B-201ENST00000390185 80 ntBASIC3□□□□□ -1.93
NPAS1Q99742 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3□□□□□ -1.93
NPAS1Q99742 RPL7P37-201ENST00000425095 738 ntBASIC3□□□□□ -1.93
NPAS1Q99742 RPL21P40-201ENST00000428586 483 ntBASIC3□□□□□ -1.93
NPAS1Q99742 AC005326.1-201ENST00000429197 123 ntBASIC3□□□□□ -1.93
NPAS1Q99742 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3□□□□□ -1.93
NPAS1Q99742 CENPBD1P1-201ENST00000464061 469 ntBASIC3□□□□□ -1.93
NPAS1Q99742 RPS27P26-201ENST00000494583 239 ntBASIC3□□□□□ -1.93
NPAS1Q99742 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3□□□□□ -1.93
NPAS1Q99742 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3□□□□□ -1.93
NPAS1Q99742 RNU5F-8P-201ENST00000515941 111 ntBASIC3□□□□□ -1.93
NPAS1Q99742 ACA59.2-201ENST00000517061 156 ntBASIC3□□□□□ -1.93
NPAS1Q99742 AC107934.2-201ENST00000518653 310 ntBASIC3□□□□□ -1.93
NPAS1Q99742 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3□□□□□ -1.93
NPAS1Q99742 AC104027.1-201ENST00000521887 300 ntBASIC3□□□□□ -1.93
NPAS1Q99742 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3□□□□□ -1.93
NPAS1Q99742 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3□□□□□ -1.93
NPAS1Q99742 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3□□□□□ -1.93
NPAS1Q99742 AC024153.1-201ENST00000603103 365 ntBASIC3□□□□□ -1.93
NPAS1Q99742 AL670379.10-201ENST00000604330 253 ntBASIC3□□□□□ -1.93
NPAS1Q99742 AL160281.1-201ENST00000605307 311 ntBASIC3□□□□□ -1.93
NPAS1Q99742 AL670379.9-201ENST00000605428 253 ntBASIC3□□□□□ -1.93
NPAS1Q99742 AC019193.3-201ENST00000609144 554 ntBASIC3□□□□□ -1.93
NPAS1Q99742 AC010680.1-201ENST00000590024 3590 ntBASIC3□□□□□ -1.93
NPAS1Q99742 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
NPAS1Q99742 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NPAS1Q99742 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.99□□□□□ -1.93
NPAS1Q99742 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPAS1Q99742 CDC27P3-201ENST00000635418 1910 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPAS1Q99742 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
NPAS1Q99742 RPL9P7-201ENST00000330965 580 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms