Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC002350.1-201ENST00000490759 375 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.05□□□□□ -2.4
COL12A1Q99715 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.05□□□□□ -2.4
COL12A1Q99715 AC092474.3-201ENST00000603022 568 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 AC007363.1-201ENST00000604736 620 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 RNU4-5P-201ENST00000607255 135 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.05□□□□□ -2.4
COL12A1Q99715 Z75746.1-201ENST00000440243 2080 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
COL12A1Q99715 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 RNU6-370P-201ENST00000411008 104 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.05□□□□□ -2.4
COL12A1Q99715 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.05□□□□□ -2.4
COL12A1Q99715 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.05□□□□□ -2.4
COL12A1Q99715 MTCYBP16-201ENST00000509187 1129 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.05□□□□□ -2.4
COL12A1Q99715 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.05□□□□□ -2.4
COL12A1Q99715 MIR3126-201ENST00000577443 74 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 AC069304.3-201ENST00000603938 1084 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 MTND5P32-201ENST00000560711 1802 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
COL12A1Q99715 Y_RNA.78-201ENST00000362970 110 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 SNORA25-201ENST00000384384 134 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
COL12A1Q99715 MIR1295A-201ENST00000408463 79 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 RNU6-575P-201ENST00000411326 105 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 MICF-203ENST00000432679 129 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 AC023347.2-201ENST00000433994 462 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.04□□□□□ -2.4
COL12A1Q99715 SNORA31.8-201ENST00000516327 108 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 Y_RNA.674-201ENST00000516362 113 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 AC093023.1-201ENST00000547375 507 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 AC087897.1-201ENST00000550134 156 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 AC004492.1-201ENST00000607036 742 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 AL355810.1-201ENST00000614629 552 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.04□□□□□ -2.4
COL12A1Q99715 AL365496.1-201ENST00000426885 215 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 AC010469.2-201ENST00000496412 480 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 MRPS36P4-201ENST00000534436 298 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 MIR3609-201ENST00000582661 80 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 AC040896.1-201ENST00000613819 479 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 AC095031.1-201ENST00000623685 672 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 FARSBP1-201ENST00000435808 1778 ntBASIC0.04□□□□□ -2.4
COL12A1Q99715 BPY2DP-201ENST00000422208 265 ntBASIC0.03□□□□□ -2.4
COL12A1Q99715 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.03□□□□□ -2.4
COL12A1Q99715 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.03□□□□□ -2.4
COL12A1Q99715 RN7SKP277-201ENST00000516895 283 ntBASIC0.03□□□□□ -2.4
COL12A1Q99715 RNA5SP291-201ENST00000517222 105 ntBASIC0.03□□□□□ -2.4
COL12A1Q99715 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.03□□□□□ -2.4
COL12A1Q99715 AL132822.1-201ENST00000617063 513 ntBASIC0.03□□□□□ -2.4
COL12A1Q99715 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.03□□□□□ -2.4
COL12A1Q99715 Y_RNA.246-201ENST00000364495 108 ntBASIC0.03□□□□□ -2.4
COL12A1Q99715 Y_RNA.256-201ENST00000364594 104 ntBASIC0.03□□□□□ -2.4
COL12A1Q99715 RNU6-339P-201ENST00000384310 107 ntBASIC0.03□□□□□ -2.4
COL12A1Q99715 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.03□□□□□ -2.4
COL12A1Q99715 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.03□□□□□ -2.4
COL12A1Q99715 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.03□□□□□ -2.4
COL12A1Q99715 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.03□□□□□ -2.4
COL12A1Q99715 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.03□□□□□ -2.4
COL12A1Q99715 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.03□□□□□ -2.4
COL12A1Q99715 AC012435.1-202ENST00000568772 240 ntBASIC0.03□□□□□ -2.4
COL12A1Q99715 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.03□□□□□ -2.4
COL12A1Q99715 AP003399.1-201ENST00000637534 361 ntBASIC0.03□□□□□ -2.4
COL12A1Q99715 ZNF680P1-201ENST00000436625 1469 ntBASIC0.03□□□□□ -2.4
COL12A1Q99715 AL353149.1-201ENST00000610667 244 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 RNU6-338P-201ENST00000383888 105 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 MIR506-201ENST00000384998 124 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 AL049545.1-201ENST00000401856 572 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 AL109913.1-201ENST00000421173 514 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.02□□□□□ -2.41
COL12A1Q99715 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.02□□□□□ -2.41
COL12A1Q99715 ELOCP32-201ENST00000548625 324 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 MIR4324-201ENST00000584846 72 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 AC105224.1-201ENST00000587055 421 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 AC091805.2-201ENST00000603848 235 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 LARP7P1-201ENST00000605576 316 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.02□□□□□ -2.41
COL12A1Q99715 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
COL12A1Q99715 RNA5SP128-201ENST00000365305 116 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 RNU6-748P-201ENST00000384648 107 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.02□□□□□ -2.41
COL12A1Q99715 snoU13.9-201ENST00000458927 103 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 snoU13.28-201ENST00000459235 104 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 RN7SKP12-201ENST00000516275 143 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 RNU4-54P-201ENST00000516428 129 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.02□□□□□ -2.41
COL12A1Q99715 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.02□□□□□ -2.41
COL12A1Q99715 AC019131.2-201ENST00000609071 870 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 AC093913.1-201ENST00000614178 329 ntBASIC0.02□□□□□ -2.41
COL12A1Q99715 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
COL12A1Q99715 MIR496-201ENST00000385226 102 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 RNU6-1328P-201ENST00000410938 106 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
COL12A1Q99715 AC244505.3-201ENST00000454598 187 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.01□□□□□ -2.41
COL12A1Q99715 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.01□□□□□ -2.41
COL12A1Q99715 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.01□□□□□ -2.41
COL12A1Q99715 RNA5SP112-201ENST00000515937 99 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 SNORD116-28-201ENST00000516123 91 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 RNU6-902P-201ENST00000517212 91 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms