Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ADAM5-202ENST00000399789 1942 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
PHOX2BQ99453 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PHOX2BQ99453 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PHOX2BQ99453 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
PHOX2BQ99453 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PHOX2BQ99453 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PHOX2BQ99453 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PHOX2BQ99453 Y_RNA.172-201ENST00000363765 102 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 RNU6-153P-201ENST00000364422 104 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 RNU6-1056P-201ENST00000383996 107 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 Y_RNA.456-201ENST00000384232 111 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 AL031003.1-201ENST00000404229 172 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 RNA5SP296-201ENST00000410523 111 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 AL365496.1-201ENST00000426885 215 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 TOMM22P2-201ENST00000430735 237 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 Z75741.1-201ENST00000446793 314 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 AC103975.1-201ENST00000482506 483 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.09□□□□□ -1.59
PHOX2BQ99453 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.09□□□□□ -1.59
PHOX2BQ99453 RNU4-57P-201ENST00000515980 135 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.09□□□□□ -1.59
PHOX2BQ99453 MIR3646-201ENST00000578301 84 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 RNU6-91P-201ENST00000607774 107 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 MIR6853-201ENST00000619642 74 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 USP8P1-201ENST00000494673 3183 ntBASIC5.09□□□□□ -1.59
PHOX2BQ99453 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.09□□□□□ -1.6
PHOX2BQ99453 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PHOX2BQ99453 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PHOX2BQ99453 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PHOX2BQ99453 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
PHOX2BQ99453 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
PHOX2BQ99453 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PHOX2BQ99453 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PHOX2BQ99453 CUL1P1-201ENST00000509510 2425 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHOX2BQ99453 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHOX2BQ99453 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
PHOX2BQ99453 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHOX2BQ99453 RNU6-600P-201ENST00000362524 99 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 SNORA71.3-201ENST00000362582 128 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 SNORA62.3-201ENST00000365110 153 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PHOX2BQ99453 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.08□□□□□ -1.6
PHOX2BQ99453 Y_RNA.415-201ENST00000384012 112 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 Y_RNA.420-201ENST00000384043 110 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 SNORA26.5-201ENST00000391215 123 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC5.08□□□□□ -1.6
PHOX2BQ99453 RPL31P41-201ENST00000477967 372 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 AC108022.1-201ENST00000493466 478 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 AC006499.6-201ENST00000511169 607 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 RN7SKP179-201ENST00000516126 217 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 Y_RNA.686-201ENST00000516548 134 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 MIR3936-201ENST00000584304 110 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 AL034555.1-201ENST00000604816 211 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 TCL6_2.1-201ENST00000615162 119 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 AL445567.2-201ENST00000618935 498 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 MIR6075-201ENST00000620782 95 ntBASIC5.08□□□□□ -1.6
PHOX2BQ99453 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.08□□□□□ -1.6
PHOX2BQ99453 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.08□□□□□ -1.6
PHOX2BQ99453 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PHOX2BQ99453 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PHOX2BQ99453 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PHOX2BQ99453 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PHOX2BQ99453 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.07□□□□□ -1.6
PHOX2BQ99453 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
PHOX2BQ99453 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHOX2BQ99453 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.07□□□□□ -1.6
PHOX2BQ99453 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHOX2BQ99453 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.07□□□□□ -1.6
PHOX2BQ99453 AL450345.1-202ENST00000605741 3881 ntBASIC5.07□□□□□ -1.6
PHOX2BQ99453 SNORD115-30-201ENST00000364117 82 ntBASIC5.07□□□□□ -1.6
PHOX2BQ99453 snoU2_19.4-201ENST00000364329 80 ntBASIC5.07□□□□□ -1.6
PHOX2BQ99453 RNA5SP509-201ENST00000364577 119 ntBASIC5.07□□□□□ -1.6
PHOX2BQ99453 Y_RNA.368-201ENST00000365547 113 ntBASIC5.07□□□□□ -1.6
PHOX2BQ99453 EIF4HP2-201ENST00000424380 563 ntBASIC5.07□□□□□ -1.6
PHOX2BQ99453 AL441985.1-201ENST00000457727 251 ntBASIC5.07□□□□□ -1.6
PHOX2BQ99453 RPL23AP70-201ENST00000483361 460 ntBASIC5.07□□□□□ -1.6
PHOX2BQ99453 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.07□□□□□ -1.6
PHOX2BQ99453 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PHOX2BQ99453 AC122688.1-201ENST00000541494 223 ntBASIC5.07□□□□□ -1.6
PHOX2BQ99453 ARF4P1-201ENST00000605447 541 ntBASIC5.07□□□□□ -1.6
PHOX2BQ99453 AC015914.2-201ENST00000618167 288 ntBASIC5.07□□□□□ -1.6
PHOX2BQ99453 RNA5SP196-201ENST00000625967 102 ntBASIC5.07□□□□□ -1.6
PHOX2BQ99453 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC5.07□□□□□ -1.6
PHOX2BQ99453 AC068205.3-201ENST00000636385 468 ntBASIC5.07□□□□□ -1.6
PHOX2BQ99453 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHOX2BQ99453 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.07□□□□□ -1.6
PHOX2BQ99453 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PHOX2BQ99453 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.07□□□□□ -1.6
PHOX2BQ99453 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PHOX2BQ99453 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
PHOX2BQ99453 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PHOX2BQ99453 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PHOX2BQ99453 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PHOX2BQ99453 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHOX2BQ99453 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.06□□□□□ -1.6
PHOX2BQ99453 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHOX2BQ99453 RNU6-454P-201ENST00000364292 107 ntBASIC5.06□□□□□ -1.6
PHOX2BQ99453 RNU6-144P-201ENST00000383951 107 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms