Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC016691.1-201ENST00000441321 413 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 MTND1P1-201ENST00000445453 368 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 FDX1P2-201ENST00000450769 375 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 AC112771.1-201ENST00000463581 102 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 AC011825.1-201ENST00000484967 388 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 SNORA25.11-201ENST00000515935 105 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 RNU2-69P-201ENST00000516061 100 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 AP001893.2-201ENST00000526949 202 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 AL133241.1-201ENST00000556832 487 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 MIR5195-201ENST00000583555 115 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 AC064807.4-201ENST00000607201 407 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 RNU6-91P-201ENST00000607774 107 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 HULC.1-201ENST00000612720 240 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 AC015540.1-201ENST00000615828 501 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 AC068792.1-201ENST00000621354 417 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 MIR3529-201ENST00000637713 78 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RAB40CQ96S21 Z75746.1-201ENST00000440243 2080 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 RBBP8P1-201ENST00000449447 1844 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 RNU6-1322P-201ENST00000364309 107 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 Y_RNA.324-201ENST00000365165 102 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 SNORA54-201ENST00000384281 123 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 MIR483-201ENST00000385070 76 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 UBA52P6-201ENST00000399822 382 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.24□□□□□ -2.05
RAB40CQ96S21 AL589823.1-201ENST00000429577 183 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 AL365400.1-201ENST00000431854 640 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 HMGB1P31-201ENST00000437242 427 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB40CQ96S21 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB40CQ96S21 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB40CQ96S21 SRRM1P2-201ENST00000464531 1192 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 AC133134.1-201ENST00000466800 359 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 DYNLL1P5-201ENST00000467158 270 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 AC096576.1-201ENST00000489014 359 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.24□□□□□ -2.05
RAB40CQ96S21 AC008885.1-201ENST00000514930 301 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 SCARNA13-201ENST00000516672 275 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 AC009812.2-201ENST00000517657 457 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB40CQ96S21 RPL7P20-201ENST00000520308 745 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 AC104383.1-201ENST00000530297 370 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB40CQ96S21 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB40CQ96S21 MIR5583-1-201ENST00000580941 59 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 AL359880.1-201ENST00000621879 266 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 MIR3651-201ENST00000630427 90 ntBASIC2.24□□□□□ -2.05
RAB40CQ96S21 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.24□□□□□ -2.05
RAB40CQ96S21 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.24□□□□□ -2.05
RAB40CQ96S21 Y_RNA.41-201ENST00000362646 102 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 RNA5SP374-201ENST00000362939 125 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 RNU6-1085P-201ENST00000363576 107 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 RNA5SP125-201ENST00000364843 120 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 Y_RNA.481-201ENST00000384373 102 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 CALM2P3-201ENST00000400429 449 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 AL139095.1-201ENST00000404326 391 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 AL606923.1-201ENST00000406616 190 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 UBE2V1P10-201ENST00000414685 269 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 AC097463.2-201ENST00000421074 142 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 NUP35P1-201ENST00000422734 947 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 AC022018.1-201ENST00000430685 241 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 PSPHP1-201ENST00000450062 261 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.23□□□□□ -2.05
RAB40CQ96S21 RNU7-180P-201ENST00000459240 63 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 AC083798.1-201ENST00000472671 131 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 RPL7P43-201ENST00000478876 753 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 SRIP1-201ENST00000489235 288 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.23□□□□□ -2.05
RAB40CQ96S21 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.23□□□□□ -2.05
RAB40CQ96S21 SMURF2P1-201ENST00000514992 481 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 RNA5SP367-201ENST00000516557 118 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 SNORA43.2-201ENST00000516652 128 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.23□□□□□ -2.05
RAB40CQ96S21 CR383656.8-201ENST00000549046 145 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.23□□□□□ -2.05
RAB40CQ96S21 RPS15AP11-201ENST00000594193 385 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 AC007621.1-201ENST00000604544 437 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.23□□□□□ -2.05
RAB40CQ96S21 AC087241.4-201ENST00000612441 480 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 uc_338.34-201ENST00000617467 174 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 AP003400.5-201ENST00000624827 617 ntBASIC2.23□□□□□ -2.05
RAB40CQ96S21 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.23□□□□□ -2.05
RAB40CQ96S21 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RAB40CQ96S21 HAUS6P2-201ENST00000433254 2404 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms