Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AP001429.1-201ENST00000602568 530 ntBASIC0.71□□□□□ -2.3
IFT140Q96RY7 AC146944.4-201ENST00000602697 718 ntBASIC0.71□□□□□ -2.3
IFT140Q96RY7 AL109620.1-201ENST00000618738 1197 ntBASIC0.71□□□□□ -2.3
IFT140Q96RY7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.71□□□□□ -2.3
IFT140Q96RY7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.71□□□□□ -2.3
IFT140Q96RY7 RNU1-23P-201ENST00000363361 144 ntBASIC0.7□□□□□ -2.3
IFT140Q96RY7 MIR597-201ENST00000384968 97 ntBASIC0.7□□□□□ -2.3
IFT140Q96RY7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.7□□□□□ -2.3
IFT140Q96RY7 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
IFT140Q96RY7 AL353691.1-201ENST00000451332 387 ntBASIC0.7□□□□□ -2.3
IFT140Q96RY7 RPL9P9-202ENST00000466501 579 ntBASIC0.7□□□□□ -2.3
IFT140Q96RY7 RNU7-40P-201ENST00000516397 64 ntBASIC0.7□□□□□ -2.3
IFT140Q96RY7 IGJP1-201ENST00000522682 475 ntBASIC0.7□□□□□ -2.3
IFT140Q96RY7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.7□□□□□ -2.3
IFT140Q96RY7 ADAM3B-201ENST00000569937 840 ntBASIC0.7□□□□□ -2.3
IFT140Q96RY7 ROCK1P1-201ENST00000573767 549 ntBASIC0.7□□□□□ -2.3
IFT140Q96RY7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.7□□□□□ -2.3
IFT140Q96RY7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.7□□□□□ -2.3
IFT140Q96RY7 AF129408.1-201ENST00000608767 431 ntBASIC0.7□□□□□ -2.3
IFT140Q96RY7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
IFT140Q96RY7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
IFT140Q96RY7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
IFT140Q96RY7 SNORA50A-201ENST00000384225 134 ntBASIC0.69□□□□□ -2.3
IFT140Q96RY7 MTCYBP38-201ENST00000417160 1123 ntBASIC0.69□□□□□ -2.3
IFT140Q96RY7 PTGES3P4-201ENST00000426243 356 ntBASIC0.69□□□□□ -2.3
IFT140Q96RY7 UBE2V2P3-201ENST00000433562 437 ntBASIC0.69□□□□□ -2.3
IFT140Q96RY7 AC002381.1-201ENST00000447049 280 ntBASIC0.69□□□□□ -2.3
IFT140Q96RY7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.69□□□□□ -2.3
IFT140Q96RY7 RNU6-416P-201ENST00000516265 103 ntBASIC0.69□□□□□ -2.3
IFT140Q96RY7 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.69□□□□□ -2.3
IFT140Q96RY7 CYCSP27-201ENST00000527643 293 ntBASIC0.69□□□□□ -2.3
IFT140Q96RY7 AC090115.3-201ENST00000553218 849 ntBASIC0.69□□□□□ -2.3
IFT140Q96RY7 BPTFP1-201ENST00000579209 492 ntBASIC0.69□□□□□ -2.3
IFT140Q96RY7 AC010620.1-201ENST00000601088 1102 ntBASIC0.69□□□□□ -2.3
IFT140Q96RY7 AC013476.2-201ENST00000614456 459 ntBASIC0.69□□□□□ -2.3
IFT140Q96RY7 MIR6718-201ENST00000616153 80 ntBASIC0.69□□□□□ -2.3
IFT140Q96RY7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.69□□□□□ -2.3
IFT140Q96RY7 AC104820.1-201ENST00000624183 307 ntBASIC0.69□□□□□ -2.3
IFT140Q96RY7 SNRPEP9-201ENST00000436794 238 ntBASIC0.68□□□□□ -2.3
IFT140Q96RY7 AL133373.1-201ENST00000497098 94 ntBASIC0.68□□□□□ -2.3
IFT140Q96RY7 RNU6-667P-201ENST00000517186 102 ntBASIC0.68□□□□□ -2.3
IFT140Q96RY7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.68□□□□□ -2.3
IFT140Q96RY7 APOOP3-201ENST00000536787 586 ntBASIC0.68□□□□□ -2.3
IFT140Q96RY7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.68□□□□□ -2.3
IFT140Q96RY7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.68□□□□□ -2.3
IFT140Q96RY7 AC012213.3-201ENST00000577199 777 ntBASIC0.68□□□□□ -2.3
IFT140Q96RY7 AL713866.2-201ENST00000603579 219 ntBASIC0.68□□□□□ -2.3
IFT140Q96RY7 AC107075.1-201ENST00000613695 314 ntBASIC0.68□□□□□ -2.3
IFT140Q96RY7 AC106800.4-201ENST00000614905 153 ntBASIC0.68□□□□□ -2.3
IFT140Q96RY7 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.68□□□□□ -2.3
IFT140Q96RY7 RNU6-778P-201ENST00000363269 103 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 MIR1302-8-201ENST00000408342 128 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.67□□□□□ -2.3
IFT140Q96RY7 CST2P1-201ENST00000425770 87 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.67□□□□□ -2.3
IFT140Q96RY7 AL353706.1-201ENST00000436728 494 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 PTGES3P1-201ENST00000439531 483 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.67□□□□□ -2.3
IFT140Q96RY7 AC245102.2-201ENST00000448956 180 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.67□□□□□ -2.3
IFT140Q96RY7 AL441985.1-201ENST00000457727 251 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 RPL32P14-201ENST00000463196 378 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 RPL30P7-201ENST00000479312 323 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 AC108729.1-201ENST00000487812 947 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
IFT140Q96RY7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.67□□□□□ -2.3
IFT140Q96RY7 AC002545.1-201ENST00000592511 181 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 AL159972.1-201ENST00000625150 448 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 U2.21-201ENST00000637295 81 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 RNA5SP299-201ENST00000391203 116 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.67□□□□□ -2.3
IFT140Q96RY7 RPS26P55-201ENST00000471178 356 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 AC025465.3-201ENST00000510570 311 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.67□□□□□ -2.3
IFT140Q96RY7 AC004805.2-201ENST00000605382 482 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 AL022345.1-201ENST00000607292 135 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 AC239868.4-201ENST00000608318 671 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 AC011939.3-201ENST00000613686 466 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 AC017037.3-201ENST00000625016 472 ntBASIC0.67□□□□□ -2.3
IFT140Q96RY7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
IFT140Q96RY7 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 RNA5SP327-201ENST00000362494 101 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 RNU6-26P-201ENST00000383985 107 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 RNA5SP100-201ENST00000410903 110 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 RNA5SP59-201ENST00000410922 110 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 AC112771.1-201ENST00000463581 102 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 AP001025.1-201ENST00000486139 332 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 RNU6-840P-201ENST00000517275 65 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 AP006587.4-201ENST00000526053 529 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.66□□□□□ -2.3
IFT140Q96RY7 AC005951.2-201ENST00000576282 495 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.66□□□□□ -2.3
IFT140Q96RY7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.66□□□□□ -2.3
IFT140Q96RY7 BBIP1P1-201ENST00000602999 279 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 AC004492.1-201ENST00000607036 742 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 AC073569.3-201ENST00000619055 682 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.66□□□□□ -2.3
IFT140Q96RY7 AC091965.5-201ENST00000624785 342 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms