Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL365496.1-201ENST00000426885 215 ntBASIC-0.08□□□□□ -2.42
CSMD1Q96PZ7 RAB11AP2-201ENST00000545905 639 ntBASIC-0.08□□□□□ -2.42
CSMD1Q96PZ7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.08□□□□□ -2.42
CSMD1Q96PZ7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.08□□□□□ -2.42
CSMD1Q96PZ7 SNORD44.1-201ENST00000363202 61 ntBASIC-0.08□□□□□ -2.42
CSMD1Q96PZ7 RNU6-119P-201ENST00000364882 107 ntBASIC-0.08□□□□□ -2.42
CSMD1Q96PZ7 Z82190.1-201ENST00000454534 490 ntBASIC-0.08□□□□□ -2.42
CSMD1Q96PZ7 AC112492.4-201ENST00000456549 352 ntBASIC-0.08□□□□□ -2.42
CSMD1Q96PZ7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.08□□□□□ -2.42
CSMD1Q96PZ7 MIR4441-201ENST00000582623 100 ntBASIC-0.08□□□□□ -2.42
CSMD1Q96PZ7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC-0.08□□□□□ -2.42
CSMD1Q96PZ7 U3.29-201ENST00000391296 212 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 ZNF736P11Y-201ENST00000442535 1213 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AC006512.1-201ENST00000468816 291 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 RPL7P43-201ENST00000478876 753 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AC136618.2-201ENST00000575091 400 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AC073544.2-201ENST00000601155 540 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AC091805.2-201ENST00000603848 235 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AC113194.1-201ENST00000606037 500 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 MIR424-201ENST00000362227 98 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 RNU7-157P-201ENST00000459600 66 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AP000797.1-201ENST00000478870 387 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 MIR892C-201ENST00000516410 77 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 RNU6-902P-201ENST00000517212 91 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 IGJP1-201ENST00000522682 475 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 ZNF663P-202ENST00000641770 1131 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 PNRC2P1-201ENST00000423940 420 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 HMGB1P29-201ENST00000505659 499 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AL022345.2-201ENST00000606307 135 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AL355816.1-201ENST00000607951 118 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 AL591926.4-201ENST00000616895 298 ntBASIC-0.09□□□□□ -2.42
CSMD1Q96PZ7 RNU6-302P-201ENST00000365249 107 ntBASIC-0.1□□□□□ -2.42
CSMD1Q96PZ7 UBE2D3P2-201ENST00000424409 445 ntBASIC-0.1□□□□□ -2.42
CSMD1Q96PZ7 MTCYBP34-201ENST00000439552 670 ntBASIC-0.1□□□□□ -2.42
CSMD1Q96PZ7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC-0.1□□□□□ -2.42
CSMD1Q96PZ7 LARP1BP2-201ENST00000486594 519 ntBASIC-0.1□□□□□ -2.42
CSMD1Q96PZ7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC-0.1□□□□□ -2.42
CSMD1Q96PZ7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC-0.1□□□□□ -2.42
CSMD1Q96PZ7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.1□□□□□ -2.42
CSMD1Q96PZ7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC-0.1□□□□□ -2.42
CSMD1Q96PZ7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.1□□□□□ -2.42
CSMD1Q96PZ7 AL513185.3-201ENST00000433335 1300 ntBASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 RPS15AP5-201ENST00000436276 388 ntBASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 AP004371.1-201ENST00000525240 214 ntBASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 MIR8074-201ENST00000615081 81 ntBASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 RNU6-10P-201ENST00000384036 107 ntBASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 RNU6-15P-201ENST00000384534 107 ntBASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 HMGN2P39-201ENST00000398005 273 ntBASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC-0.1□□□□□ -2.43
CSMD1Q96PZ7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 U1.36-201ENST00000620684 176 ntBASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 MIR4315-1-201ENST00000636800 73 ntBASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 MIR4315-2-201ENST00000640925 73 ntBASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 TPMTP4-201ENST00000450749 678 ntBASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 AC092757.1-201ENST00000467293 467 ntBASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 AC107626.1-201ENST00000471084 183 ntBASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 AC012435.1-202ENST00000568772 240 ntBASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 MTCYBP22-201ENST00000603788 447 ntBASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 AL513534.2-201ENST00000603836 250 ntBASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 RNU4-45P-201ENST00000365469 141 ntBASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 AC108157.1-201ENST00000510511 539 ntBASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 RNA5SP227-201ENST00000516184 113 ntBASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 AC008147.4-201ENST00000617570 1204 ntBASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC-0.11□□□□□ -2.43
CSMD1Q96PZ7 RNA5SP214-201ENST00000363378 118 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 SNORA32.1-201ENST00000364514 115 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 RNU7-23P-201ENST00000459465 62 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 AC010631.1-201ENST00000474150 156 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 AC108740.1-201ENST00000498629 225 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 AF213884.2-201ENST00000510417 903 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 AC007363.1-201ENST00000604736 620 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 AL158163.2-201ENST00000619110 700 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 RNU4-12P-201ENST00000365233 139 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 MIR1250-201ENST00000408098 113 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 USP9YP26-201ENST00000421008 661 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 USP9YP18-201ENST00000425912 695 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 CETN4P-201ENST00000432407 469 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 AL512844.2-201ENST00000433990 593 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 RNFT1P2-201ENST00000443064 757 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms