Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 LINC02555-201ENST00000563933 1951 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 RNA5SP130-201ENST00000364431 114 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 RNU6-200P-201ENST00000364743 107 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 RNU6-898P-201ENST00000365627 104 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 RNU6-968P-201ENST00000384076 107 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 MIR518D-201ENST00000385014 87 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 CYCSP32-201ENST00000440548 321 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 AC006499.6-201ENST00000511169 607 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 RNU6-138P-201ENST00000515952 107 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 SNORA31.6-201ENST00000516241 130 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 RN7SKP272-201ENST00000516988 232 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 AC010928.2-201ENST00000588017 287 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 MIR432-201ENST00000606207 94 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 Y_RNA.772-201ENST00000606692 102 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 AL365434.2-201ENST00000607979 234 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 MIR4727-201ENST00000622232 55 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 SCARNA4-201ENST00000629045 128 ntBASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTCHD1Q96NR3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 RNU6-942P-201ENST00000363002 107 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 RNU6-778P-201ENST00000363269 103 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 Y_RNA.143-201ENST00000363520 106 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 MIR513A2-201ENST00000385249 127 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 RNU2-71P-201ENST00000411395 189 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 AL356095.1-201ENST00000417217 199 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 MTND5P15-201ENST00000434246 349 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 AC098831.1-201ENST00000440661 216 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 AC009296.1-201ENST00000443146 155 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 RPL23AP75-201ENST00000491601 451 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 RPL29P14-201ENST00000495837 428 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 AC020593.1-201ENST00000507399 299 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 DEFB108E-201ENST00000524692 240 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 AC020895.1-201ENST00000595362 272 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 AC010900.2-201ENST00000604508 210 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 MIR6867-201ENST00000610636 67 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 AC068724.3-201ENST00000625906 87 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 AC008725.1-201ENST00000605123 2263 ntBASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTCHD1Q96NR3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 SPRR2C-201ENST00000290702 219 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 RNU6-50P-201ENST00000362356 103 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 SNORA60-201ENST00000362396 134 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 SNORD81.1-201ENST00000363064 77 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 Y_RNA.117-201ENST00000363294 101 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 SNORD35B-201ENST00000363660 87 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 RNU6-338P-201ENST00000383888 105 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 RNU1-73P-201ENST00000383971 164 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 RNU1-13P-201ENST00000384499 162 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 Y_RNA.539-201ENST00000384635 107 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 MIR3074-201ENST00000384885 81 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 RNU2-37P-201ENST00000410695 177 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 HSPE1P12-201ENST00000412576 301 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 RAB9AP3-201ENST00000412737 573 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 RPL26P27-201ENST00000414397 437 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 HMGN2P30-201ENST00000423237 256 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 AP000907.1-201ENST00000428428 510 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 OR4C10P-201ENST00000434991 931 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 AC243964.1-201ENST00000441814 261 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms