Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RPL7L1P10-201ENST00000427790 463 ntBASIC-0.15□□□□□ -2.43
CFAP54Q96N23 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.15□□□□□ -2.43
CFAP54Q96N23 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC-0.15□□□□□ -2.43
CFAP54Q96N23 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC-0.16□□□□□ -2.43
CFAP54Q96N23 AC080013.4-201ENST00000607624 649 ntBASIC-0.16□□□□□ -2.43
CFAP54Q96N23 TPTE2P4-201ENST00000258589 1605 ntBASIC-0.16□□□□□ -2.43
CFAP54Q96N23 RNU6-1155P-201ENST00000363554 107 ntBASIC-0.16□□□□□ -2.44
CFAP54Q96N23 RNU6-119P-201ENST00000364882 107 ntBASIC-0.16□□□□□ -2.44
CFAP54Q96N23 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
CFAP54Q96N23 U3.29-201ENST00000391296 212 ntBASIC-0.16□□□□□ -2.44
CFAP54Q96N23 RNU4-63P-201ENST00000411313 118 ntBASIC-0.16□□□□□ -2.44
CFAP54Q96N23 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC-0.16□□□□□ -2.44
CFAP54Q96N23 TRIM60P3Y-201ENST00000432201 673 ntBASIC-0.16□□□□□ -2.44
CFAP54Q96N23 AC112492.4-201ENST00000456549 352 ntBASIC-0.16□□□□□ -2.44
CFAP54Q96N23 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.16□□□□□ -2.44
CFAP54Q96N23 AC108157.1-201ENST00000510511 539 ntBASIC-0.16□□□□□ -2.44
CFAP54Q96N23 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.16□□□□□ -2.44
CFAP54Q96N23 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.16□□□□□ -2.44
CFAP54Q96N23 AL022345.2-201ENST00000606307 135 ntBASIC-0.16□□□□□ -2.44
CFAP54Q96N23 AC008147.4-201ENST00000617570 1204 ntBASIC-0.16□□□□□ -2.44
CFAP54Q96N23 U1.36-201ENST00000620684 176 ntBASIC-0.16□□□□□ -2.44
CFAP54Q96N23 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.16□□□□□ -2.44
CFAP54Q96N23 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.17□□□□□ -2.44
CFAP54Q96N23 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC-0.17□□□□□ -2.44
CFAP54Q96N23 AC021739.1-201ENST00000559631 174 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 AC136618.2-201ENST00000575091 400 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 MIR3681-201ENST00000580089 72 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.17□□□□□ -2.44
CFAP54Q96N23 AC007363.1-201ENST00000604736 620 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 AC106858.1-201ENST00000637497 429 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 RNU6V-201ENST00000384105 107 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 RNU6-110P-201ENST00000384508 104 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 RNU6-160P-201ENST00000384591 107 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
CFAP54Q96N23 AC092423.1-201ENST00000430165 186 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 MTATP6P23-201ENST00000440153 476 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC-0.17□□□□□ -2.44
CFAP54Q96N23 Z82190.1-201ENST00000454534 490 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 RNU7-23P-201ENST00000459465 62 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.17□□□□□ -2.44
CFAP54Q96N23 AC008443.7-201ENST00000622195 246 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 MIR587-201ENST00000384845 96 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 RNA5SP496-201ENST00000391240 109 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 USP9YP26-201ENST00000421008 661 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 USP9YP18-201ENST00000425912 695 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 USP9YP24-201ENST00000434374 697 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 USP9YP17-201ENST00000444617 696 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC-0.17□□□□□ -2.44
CFAP54Q96N23 AC091874.1-201ENST00000511402 339 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 RNU5F-8P-201ENST00000515941 111 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC-0.17□□□□□ -2.44
CFAP54Q96N23 AL355816.1-201ENST00000607951 118 ntBASIC-0.17□□□□□ -2.44
CFAP54Q96N23 RNY4P7-201ENST00000364600 96 ntBASIC-0.18□□□□□ -2.44
CFAP54Q96N23 AC096531.1-201ENST00000419107 107 ntBASIC-0.18□□□□□ -2.44
CFAP54Q96N23 MIR3126-201ENST00000577443 74 ntBASIC-0.18□□□□□ -2.44
CFAP54Q96N23 AC068790.6-201ENST00000602558 258 ntBASIC-0.18□□□□□ -2.44
CFAP54Q96N23 AL121992.2-201ENST00000606262 256 ntBASIC-0.18□□□□□ -2.44
CFAP54Q96N23 AL135790.2-201ENST00000437701 267 ntBASIC-0.18□□□□□ -2.44
CFAP54Q96N23 HSPE1P9-201ENST00000440046 311 ntBASIC-0.18□□□□□ -2.44
CFAP54Q96N23 AL353691.1-201ENST00000451332 387 ntBASIC-0.18□□□□□ -2.44
CFAP54Q96N23 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC-0.18□□□□□ -2.44
CFAP54Q96N23 MTATP6P22-201ENST00000507369 598 ntBASIC-0.18□□□□□ -2.44
CFAP54Q96N23 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.18□□□□□ -2.44
CFAP54Q96N23 AP003034.1-201ENST00000534621 422 ntBASIC-0.18□□□□□ -2.44
CFAP54Q96N23 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.18□□□□□ -2.44
CFAP54Q96N23 AC004832.4-201ENST00000608952 331 ntBASIC-0.18□□□□□ -2.44
CFAP54Q96N23 MTCYBP34-201ENST00000439552 670 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC-0.19□□□□□ -2.44
CFAP54Q96N23 MTND5P32-201ENST00000560711 1802 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 UBE2D3P2-201ENST00000424409 445 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC-0.19□□□□□ -2.44
CFAP54Q96N23 AC092757.1-201ENST00000467293 467 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 AC021146.9-201ENST00000512503 156 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 MIR8074-201ENST00000615081 81 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 AL591926.4-201ENST00000616895 298 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 AL596245.1-201ENST00000618994 362 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 AP000943.4-201ENST00000622912 357 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.19□□□□□ -2.44
CFAP54Q96N23 AC100810.6-201ENST00000638068 285 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 SNORD114-5-201ENST00000362928 70 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 HMGN2P39-201ENST00000398005 273 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 DDX3P2-201ENST00000446138 111 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 AC107626.1-201ENST00000471084 183 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 AF213884.2-201ENST00000510417 903 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 AC121334.2-201ENST00000605387 271 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 AC018755.4-201ENST00000619715 454 ntBASIC-0.19□□□□□ -2.44
CFAP54Q96N23 CALM2P3-201ENST00000400429 449 ntBASIC-0.2□□□□□ -2.44
CFAP54Q96N23 U8.21-201ENST00000459536 136 ntBASIC-0.2□□□□□ -2.44
CFAP54Q96N23 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.2□□□□□ -2.44
CFAP54Q96N23 AC004923.2-201ENST00000529649 369 ntBASIC-0.2□□□□□ -2.44
CFAP54Q96N23 AC090888.2-201ENST00000559765 1144 ntBASIC-0.2□□□□□ -2.44
CFAP54Q96N23 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
CFAP54Q96N23 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
CFAP54Q96N23 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.2□□□□□ -2.44
CFAP54Q96N23 SNORD114-9-201ENST00000364370 72 ntBASIC-0.2□□□□□ -2.44
CFAP54Q96N23 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms