Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.7□□□□□ -1.98
CMTM3Q96MX0 COPS8P3-201ENST00000526024 482 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.7□□□□□ -1.98
CMTM3Q96MX0 AC078814.3-201ENST00000553036 491 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 AC090897.2-201ENST00000581715 130 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 AL161756.2-201ENST00000604597 246 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 AC069294.1-201ENST00000608397 350 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 ATP5A1P2-202ENST00000616464 443 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 MIR6733-201ENST00000635723 61 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 AC027514.1-201ENST00000588561 1603 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.7□□□□□ -1.98
CMTM3Q96MX0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.69□□□□□ -1.98
CMTM3Q96MX0 OR56A5-201ENST00000340110 738 ntBASIC2.69□□□□□ -1.98
CMTM3Q96MX0 RNU6-527P-201ENST00000363425 104 ntBASIC2.69□□□□□ -1.98
CMTM3Q96MX0 MIR218-2-201ENST00000385006 110 ntBASIC2.69□□□□□ -1.98
CMTM3Q96MX0 MIR548F1-201ENST00000408667 84 ntBASIC2.69□□□□□ -1.98
CMTM3Q96MX0 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.69□□□□□ -1.98
CMTM3Q96MX0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.69□□□□□ -1.98
CMTM3Q96MX0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.69□□□□□ -1.98
CMTM3Q96MX0 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.69□□□□□ -1.98
CMTM3Q96MX0 UBE2V1P8-201ENST00000437166 265 ntBASIC2.69□□□□□ -1.98
CMTM3Q96MX0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.69□□□□□ -1.98
CMTM3Q96MX0 AC122718.1-201ENST00000439448 744 ntBASIC2.69□□□□□ -1.98
CMTM3Q96MX0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.69□□□□□ -1.98
CMTM3Q96MX0 EEF1B2P7-201ENST00000451177 676 ntBASIC2.69□□□□□ -1.98
CMTM3Q96MX0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.69□□□□□ -1.98
CMTM3Q96MX0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.69□□□□□ -1.98
CMTM3Q96MX0 AC011352.1-201ENST00000512300 793 ntBASIC2.69□□□□□ -1.98
CMTM3Q96MX0 AC091826.1-201ENST00000514065 313 ntBASIC2.69□□□□□ -1.98
CMTM3Q96MX0 SNORA25.11-201ENST00000515935 105 ntBASIC2.69□□□□□ -1.98
CMTM3Q96MX0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.69□□□□□ -1.98
CMTM3Q96MX0 MIR2682-201ENST00000580305 110 ntBASIC2.69□□□□□ -1.98
CMTM3Q96MX0 RNU6-85P-201ENST00000605989 107 ntBASIC2.69□□□□□ -1.98
CMTM3Q96MX0 AC084782.3-201ENST00000612282 578 ntBASIC2.69□□□□□ -1.98
CMTM3Q96MX0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.69□□□□□ -1.98
CMTM3Q96MX0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.69□□□□□ -1.98
CMTM3Q96MX0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
CMTM3Q96MX0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AC009487.2-201ENST00000420969 6821 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 Y_RNA.167-201ENST00000363735 109 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CMTM3Q96MX0 SNORD115-47-201ENST00000391226 86 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 PTMAP2-201ENST00000397627 327 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AL451074.5-201ENST00000415894 435 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.68□□□□□ -1.98
CMTM3Q96MX0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 SRIP2-201ENST00000428470 166 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AC018644.1-201ENST00000429934 551 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 MTND1P4-201ENST00000435196 415 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.68□□□□□ -1.98
CMTM3Q96MX0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AC013470.1-201ENST00000453438 462 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 RNU7-138P-201ENST00000459479 64 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AC117503.1-201ENST00000472241 394 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 SMURF2P1-201ENST00000514992 481 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 RNA5SP76-201ENST00000516277 87 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 RNU1-95P-201ENST00000516357 160 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 RNU6-1069P-201ENST00000516612 133 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 RNU1-128P-201ENST00000516704 160 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AC109329.2-201ENST00000519658 482 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 CKS1BP7-201ENST00000522230 235 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AC010186.2-204ENST00000537668 439 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AC105137.2-201ENST00000569073 466 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AC105245.1-201ENST00000581934 244 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AC107871.2-201ENST00000612894 502 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 MIR3688-2-201ENST00000636963 87 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AC024614.3-201ENST00000637860 256 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
CMTM3Q96MX0 AC121333.1-201ENST00000567488 2709 ntBASIC2.68□□□□□ -1.98
CMTM3Q96MX0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CMTM3Q96MX0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CMTM3Q96MX0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.67□□□□□ -1.98
CMTM3Q96MX0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.67□□□□□ -1.98
CMTM3Q96MX0 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 Y_RNA.89-201ENST00000363031 102 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 RNU6-105P-201ENST00000363909 104 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 RNU6-522P-201ENST00000364497 107 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 Y_RNA.453-201ENST00000384223 109 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 EIF1P1-201ENST00000421436 341 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 Z82209.1-201ENST00000422141 2135 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 AL445584.1-201ENST00000431451 330 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.67□□□□□ -1.98
CMTM3Q96MX0 AC007969.2-201ENST00000441891 191 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.67□□□□□ -1.98
CMTM3Q96MX0 RPL7P12-201ENST00000446719 750 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 AL133547.1-201ENST00000448546 220 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 RN7SL20P-201ENST00000488827 297 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 RNU1-104P-201ENST00000517280 175 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.67□□□□□ -1.98
CMTM3Q96MX0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CMTM3Q96MX0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.67□□□□□ -1.98
CMTM3Q96MX0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.67□□□□□ -1.98
CMTM3Q96MX0 AC069200.1-201ENST00000609511 323 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 AL034408.1-202ENST00000636088 415 ntBASIC2.67□□□□□ -1.98
CMTM3Q96MX0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.67□□□□□ -1.98
CMTM3Q96MX0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms