Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CALR3Q96L12 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.78□□□□□ -1.64
CALR3Q96L12 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CALR3Q96L12 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.78□□□□□ -1.64
CALR3Q96L12 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CALR3Q96L12 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.65
CALR3Q96L12 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CALR3Q96L12 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.77□□□□□ -1.65
CALR3Q96L12 RNU1-15P-201ENST00000353977 144 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 RNU4-90P-201ENST00000362773 141 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 RNA5SP507-201ENST00000363603 121 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 RNU6-280P-201ENST00000364145 104 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 RNU6-200P-201ENST00000364743 107 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
CALR3Q96L12 SNORA11.5-201ENST00000408163 128 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 RNA5SP38-201ENST00000410750 119 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 RNU6-1001P-201ENST00000411265 100 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 AC019205.3-201ENST00000424573 156 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.77□□□□□ -1.65
CALR3Q96L12 AC005154.2-201ENST00000438110 379 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 AC005002.2-201ENST00000438228 269 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 AC012671.1-201ENST00000451912 203 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 AP000705.1-201ENST00000454567 350 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.77□□□□□ -1.65
CALR3Q96L12 PPIAP15-201ENST00000479662 484 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.77□□□□□ -1.65
CALR3Q96L12 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.77□□□□□ -1.65
CALR3Q96L12 MIR4489-201ENST00000578869 62 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 MIR3667-201ENST00000581025 74 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.77□□□□□ -1.65
CALR3Q96L12 BRDTP1-201ENST00000605735 677 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 AC007546.2-201ENST00000623996 360 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CALR3Q96L12 UBE3AP2-201ENST00000429033 2259 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CALR3Q96L12 AC010680.1-201ENST00000590024 3590 ntBASIC4.77□□□□□ -1.65
CALR3Q96L12 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CALR3Q96L12 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CALR3Q96L12 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.77□□□□□ -1.65
CALR3Q96L12 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CALR3Q96L12 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CALR3Q96L12 OTUD4P1-201ENST00000237841 3067 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CALR3Q96L12 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CALR3Q96L12 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.76□□□□□ -1.65
CALR3Q96L12 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CALR3Q96L12 LINC02471-203ENST00000641941 4752 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CALR3Q96L12 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CALR3Q96L12 MIR329-1-201ENST00000385028 80 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 EI24P2-201ENST00000397776 1076 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 RNU5A-5P-201ENST00000411054 116 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 RPL23AP27-201ENST00000415161 451 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 AL591419.1-201ENST00000427423 339 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 AL353748.1-201ENST00000440753 474 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.76□□□□□ -1.65
CALR3Q96L12 RNA5SP73-201ENST00000516744 108 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 IGLV2-28-201ENST00000520681 304 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.76□□□□□ -1.65
CALR3Q96L12 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.76□□□□□ -1.65
CALR3Q96L12 TRAV8-5-201ENST00000537369 341 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.76□□□□□ -1.65
CALR3Q96L12 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.76□□□□□ -1.65
CALR3Q96L12 AC105137.2-201ENST00000569073 466 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 AC136624.4-201ENST00000573044 370 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 BX284668.6-201ENST00000606899 438 ntBASIC4.76□□□□□ -1.65
CALR3Q96L12 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CALR3Q96L12 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CALR3Q96L12 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CALR3Q96L12 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.76□□□□□ -1.65
CALR3Q96L12 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CALR3Q96L12 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CALR3Q96L12 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CALR3Q96L12 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CALR3Q96L12 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CALR3Q96L12 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.75□□□□□ -1.65
CALR3Q96L12 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.75□□□□□ -1.65
CALR3Q96L12 AL079305.1-201ENST00000623159 3008 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 Y_RNA.54-201ENST00000362766 105 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 RNU5F-3P-201ENST00000363767 117 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 RNU6-290P-201ENST00000365212 101 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 RNU6-1145P-201ENST00000384246 107 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CALR3Q96L12 SNORD58.1-201ENST00000391313 66 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 CYCSP48-201ENST00000417124 323 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.75□□□□□ -1.65
CALR3Q96L12 HMGB1P37-201ENST00000439613 609 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.75□□□□□ -1.65
CALR3Q96L12 AL139109.1-201ENST00000455491 297 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 AL441985.1-201ENST00000457727 251 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 RPS23P7-201ENST00000466210 444 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 SEPT14P8-201ENST00000508026 178 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 RNU6-138P-201ENST00000515952 107 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 SNORA31.16-201ENST00000516773 139 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 SCARNA24.2-201ENST00000516968 130 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.75□□□□□ -1.65
CALR3Q96L12 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CALR3Q96L12 AL078605.1-201ENST00000603529 500 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 AC009779.6-201ENST00000603972 165 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms