Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNU1-148P-201ENST00000384472 162 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 RNU6-748P-201ENST00000384648 107 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 RNU6-817P-201ENST00000391083 104 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 RNU2-36P-201ENST00000410361 191 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 SSR1P2-201ENST00000415208 787 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.98□□□□□ -2.09
USP47Q96K76 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.98□□□□□ -2.09
USP47Q96K76 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.98□□□□□ -2.09
USP47Q96K76 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USP47Q96K76 SNORD97-201ENST00000459187 142 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AC112771.1-201ENST00000463581 102 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AC008526.1-201ENST00000509149 338 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AC118273.2-201ENST00000532092 465 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.98□□□□□ -2.09
USP47Q96K76 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.98□□□□□ -2.09
USP47Q96K76 AL031281.1-201ENST00000604049 488 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AP000860.1-201ENST00000605250 559 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USP47Q96K76 TEX21P-201ENST00000447107 1476 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 CDC27P3-201ENST00000635418 1910 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
USP47Q96K76 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 U8.1-201ENST00000362843 134 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 MIR301A-201ENST00000385261 86 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 RPS20P2-201ENST00000402520 389 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.97□□□□□ -2.09
USP47Q96K76 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.97□□□□□ -2.09
USP47Q96K76 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.97□□□□□ -2.09
USP47Q96K76 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.97□□□□□ -2.09
USP47Q96K76 AC244505.5-201ENST00000443639 207 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 AC093899.1-201ENST00000457984 376 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 AL139824.2-201ENST00000458731 1095 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.97□□□□□ -2.09
USP47Q96K76 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.97□□□□□ -2.09
USP47Q96K76 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.97□□□□□ -2.09
USP47Q96K76 AC116347.2-201ENST00000514912 523 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 MTND2P7-201ENST00000521337 640 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 CYCSP26-201ENST00000534107 320 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 MTND1P8-201ENST00000571424 950 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.97□□□□□ -2.09
USP47Q96K76 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.97□□□□□ -2.09
USP47Q96K76 AC105148.1-201ENST00000604961 409 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 AC108747.1-201ENST00000609508 535 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 AC092106.3-201ENST00000611308 722 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 AL365204.3-201ENST00000612448 685 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 AC006338.1-201ENST00000618453 749 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 MIR5739-201ENST00000619803 80 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 AL353770.2-201ENST00000620024 78 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 MTND5P42-201ENST00000637720 498 ntBASIC1.97□□□□□ -2.09
USP47Q96K76 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 RNU6-234P-201ENST00000365229 104 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 SMIM11P1-201ENST00000369586 178 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 RNU2-63P-201ENST00000410792 194 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 RPS24P7-201ENST00000416921 246 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 AL022400.1-201ENST00000423946 935 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.96□□□□□ -2.1
USP47Q96K76 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.96□□□□□ -2.1
USP47Q96K76 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.96□□□□□ -2.1
USP47Q96K76 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.96□□□□□ -2.1
USP47Q96K76 CR769776.1-201ENST00000441254 787 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.96□□□□□ -2.1
USP47Q96K76 BTF3P15-201ENST00000455606 336 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 AL121594.1-201ENST00000475906 575 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 AC023194.1-201ENST00000493084 308 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 MTCYBP18-201ENST00000501056 747 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.96□□□□□ -2.1
USP47Q96K76 RNU5A-4P-201ENST00000516588 111 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 RNU6-1003P-201ENST00000517099 105 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.96□□□□□ -2.1
USP47Q96K76 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.96□□□□□ -2.1
USP47Q96K76 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.96□□□□□ -2.1
USP47Q96K76 AC112187.2-201ENST00000604345 283 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 AL355297.2-201ENST00000604792 129 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 AC130324.3-201ENST00000614165 542 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 AL031601.2-202ENST00000622650 282 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 FRG1KP-201ENST00000623592 341 ntBASIC1.96□□□□□ -2.1
USP47Q96K76 SNORA16B-201ENST00000364674 135 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 RNU6-53P-201ENST00000365367 106 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 RNU5E-6P-201ENST00000365574 115 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
USP47Q96K76 RNU6-1200P-201ENST00000384162 107 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 Y_RNA.540-201ENST00000384638 111 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 RPL21P1-201ENST00000399532 476 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.95□□□□□ -2.1
USP47Q96K76 AL591212.2-201ENST00000433923 257 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 AC016691.1-201ENST00000441321 413 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 AC004223.1-201ENST00000479840 271 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.95□□□□□ -2.1
USP47Q96K76 RNU6-678P-201ENST00000516832 109 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 SNORA31.19-201ENST00000517079 126 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.95□□□□□ -2.1
USP47Q96K76 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.95□□□□□ -2.1
USP47Q96K76 MIR4999-201ENST00000585029 91 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 AC022893.3-201ENST00000607665 437 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms