Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 RNU6-1318P-201ENST00000365389 103 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 RNU6-1329P-201ENST00000365664 107 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 Y_RNA.389-201ENST00000383924 113 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 RNU6-26P-201ENST00000383985 107 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 SNORA36C-201ENST00000384289 132 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 MIR517A-201ENST00000385001 87 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 SNORD88.1-201ENST00000408684 91 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 AC063979.1-201ENST00000415539 377 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 CRYBB2P1-203ENST00000415709 538 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 AC114482.1-201ENST00000418010 247 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 AL451062.2-201ENST00000427515 271 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 RPL39P40-201ENST00000445481 146 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 FTH1P25-201ENST00000447665 469 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 AL133547.1-201ENST00000448546 220 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 SNORD105B-201ENST00000458770 79 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 RPS15AP34-201ENST00000487776 387 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 HMGB1P30-201ENST00000492455 606 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 HMGN1P11-201ENST00000508668 303 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 AC104576.1-201ENST00000524225 88 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 uc_338.25-201ENST00000613756 156 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 CR392039.5-201ENST00000623201 510 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 AC009812.4-201ENST00000569134 1805 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 FAM35CP-201ENST00000554755 2470 ntBASIC3.48□□□□□ -1.85
PDLIM2Q96JY6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 RNU6-238P-201ENST00000363313 106 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 RNU1-115P-201ENST00000365329 160 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 RNU6-842P-201ENST00000384269 107 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 MIR578-201ENST00000384828 96 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 Y_RNA.645-201ENST00000391229 102 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 SNORA11-201ENST00000408789 128 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 RNA5SP129-201ENST00000410276 118 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 Y_RNA.618-201ENST00000410949 107 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 AC096664.2-201ENST00000411843 406 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 AC243428.1-201ENST00000421099 264 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 DPH3P2-201ENST00000422618 250 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 AC079780.1-201ENST00000428259 207 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 RPL21P2-201ENST00000440049 481 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 AL360271.2-201ENST00000447710 161 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 SNORA84-201ENST00000459229 133 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 AC068781.1-201ENST00000488231 618 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 RN7SL633P-201ENST00000488974 297 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 AC018437.1-201ENST00000492214 406 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 AC116655.1-201ENST00000508324 901 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 RNU6-635P-201ENST00000516651 102 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 GNAI2P1-201ENST00000541815 315 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 MIR1254-2-201ENST00000579553 63 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 AC113195.1-201ENST00000579952 141 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 MIR548AC-201ENST00000585049 88 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 AC034102.8-201ENST00000615146 484 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 AC015967.1-201ENST00000619893 476 ntBASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM2Q96JY6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.46□□□□□ -1.85
PDLIM2Q96JY6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
PDLIM2Q96JY6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PDLIM2Q96JY6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.46□□□□□ -1.85
PDLIM2Q96JY6 AL139811.1-201ENST00000424779 2299 ntBASIC3.46□□□□□ -1.85
PDLIM2Q96JY6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 Y_RNA.153-201ENST00000363615 91 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 RNA5SP167-201ENST00000365461 116 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 SET-203ENST00000372688 801 ntTSL 2 BASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 Y_RNA.534-201ENST00000384599 112 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 Y_RNA.574-201ENST00000384766 95 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 MIR124-3-201ENST00000384866 87 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 SNORD73A-201ENST00000386062 65 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 RPL21P17-201ENST00000397467 475 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 RAB9AP3-201ENST00000412737 573 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 SYF2P2-201ENST00000417620 583 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 AL035423.1-201ENST00000420331 213 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 AL592045.1-201ENST00000429867 352 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 CBX3P6-201ENST00000430257 527 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 RAB9AP1-201ENST00000449393 573 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 PCMTD1P1-201ENST00000455560 355 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 AC008571.1-201ENST00000467232 300 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 AC110794.1-201ENST00000505816 425 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 AC109446.1-201ENST00000566172 220 ntBASIC3.46□□□□□ -1.86
PDLIM2Q96JY6 OR1M4P-201ENST00000589199 287 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms