Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AP001596.2-201ENST00000608410 312 ntBASIC0.08□□□□□ -2.4
SPG11Q96JI7 AC090116.1-201ENST00000615679 446 ntBASIC0.08□□□□□ -2.4
SPG11Q96JI7 MIR8065-201ENST00000620577 100 ntBASIC0.08□□□□□ -2.4
SPG11Q96JI7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
SPG11Q96JI7 MTND5P32-201ENST00000560711 1802 ntBASIC0.08□□□□□ -2.4
SPG11Q96JI7 MIR635-201ENST00000384830 98 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
SPG11Q96JI7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 RNU2-36P-201ENST00000410361 191 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC023141.4-201ENST00000412031 328 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 GTF2IP20-201ENST00000431663 360 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 MIR892C-201ENST00000516410 77 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC090888.1-201ENST00000561335 1141 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC091489.2-201ENST00000566263 604 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 MIR3921-201ENST00000577308 85 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC011260.1-201ENST00000578420 472 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 MIR4765-201ENST00000585007 77 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC115085.1-201ENST00000588924 229 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC055764.2-201ENST00000610089 670 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 uc_338.15-201ENST00000615470 191 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC009033.1-201ENST00000624279 431 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.07□□□□□ -2.4
SPG11Q96JI7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 RNA5SP451-201ENST00000410588 110 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 RPS24P7-201ENST00000416921 246 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 RPS15AP40-201ENST00000419621 391 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 AL714022.1-201ENST00000439897 151 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC116337.2-201ENST00000477662 156 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 FAM60CP-201ENST00000591086 664 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 AP001330.4-201ENST00000604350 154 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 SNRPGP20-201ENST00000604477 205 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 LARP7P1-201ENST00000605576 316 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC068276.1-201ENST00000605793 379 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 AC073308.1-201ENST00000623696 305 ntBASIC0.07□□□□□ -2.4
SPG11Q96JI7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.07□□□□□ -2.4
SPG11Q96JI7 RNU4-23P-201ENST00000362839 140 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 SNORD44.1-201ENST00000363202 61 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 Y_RNA.146-201ENST00000363549 102 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 RNU6-1074P-201ENST00000383995 104 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 RNU6-348P-201ENST00000384386 107 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 MTCO2P8-201ENST00000412213 658 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.06□□□□□ -2.4
SPG11Q96JI7 RNU7-23P-201ENST00000459465 62 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 AC006512.1-201ENST00000468816 291 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.06□□□□□ -2.4
SPG11Q96JI7 SMURF2P1-201ENST00000514992 481 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 SCARNA8-201ENST00000515924 131 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 SNORA31.6-201ENST00000516241 130 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 SNORA70.16-201ENST00000516390 95 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 Y_RNA.684-201ENST00000516510 99 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 AC092470.1-201ENST00000546187 132 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.06□□□□□ -2.4
SPG11Q96JI7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
SPG11Q96JI7 RNU6-349P-201ENST00000362402 107 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 RNU6-1331P-201ENST00000363658 106 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 RNU6-1222P-201ENST00000384615 107 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 RPL26P27-201ENST00000414397 437 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 RPL31P3-201ENST00000458430 332 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.06□□□□□ -2.4
SPG11Q96JI7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.06□□□□□ -2.4
SPG11Q96JI7 AC125611.1-201ENST00000549563 229 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 AC018659.1-201ENST00000551083 169 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.06□□□□□ -2.4
SPG11Q96JI7 MIR3937-201ENST00000580135 106 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.06□□□□□ -2.4
SPG11Q96JI7 AL355877.2-201ENST00000603670 358 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 AC105129.3-201ENST00000605455 485 ntBASIC0.06□□□□□ -2.4
SPG11Q96JI7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 MIR30A-201ENST00000385092 71 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 RNU6-837P-201ENST00000391056 108 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 MIR1250-201ENST00000408098 113 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 RNU4-63P-201ENST00000411313 118 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC078974.1-201ENST00000411597 223 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC092634.6-201ENST00000418558 192 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 MTCO1P44-201ENST00000441935 243 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC091805.2-201ENST00000603848 235 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 MIR6134-201ENST00000617606 109 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC134026.1-201ENST00000623249 2239 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 RNU6-674P-201ENST00000363831 107 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 RNU6-317P-201ENST00000384031 107 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 MT-TQ-201ENST00000387372 72 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms