Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RNA5SP267-201ENST00000364893 126 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 SNORA51.4-201ENST00000364993 124 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-8-201ENST00000365467 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
VPS50Q96JG6 Z98749.2-208ENST00000381646 500 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-25P-201ENST00000383873 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-1-201ENST00000383898 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-48P-201ENST00000384161 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-36P-201ENST00000384172 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-4P-201ENST00000384205 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-5P-201ENST00000384238 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-3P-201ENST00000384314 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-16P-201ENST00000384385 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-15P-201ENST00000384534 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-2-201ENST00000384627 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-29P-201ENST00000384637 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-9-201ENST00000384776 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-33P-201ENST00000384793 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RPS20P15-201ENST00000412792 311 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 AC099548.1-201ENST00000421443 426 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 AC098614.2-201ENST00000426040 255 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 AC097713.2-201ENST00000430199 356 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.28□□□□□ -1.88
VPS50Q96JG6 FABP5P14-201ENST00000437273 393 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS50Q96JG6 BRK1P2-201ENST00000442875 223 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS50Q96JG6 Y_RNA.635-201ENST00000459041 101 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 SNORD19B-201ENST00000459623 84 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 AC130509.1-201ENST00000464158 433 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RPL23AP67-201ENST00000465341 474 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 HMGN1P13-201ENST00000505795 138 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 Y_RNA.701-201ENST00000516812 110 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-703P-201ENST00000516946 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS50Q96JG6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS50Q96JG6 AC026371.1-201ENST00000551867 419 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS50Q96JG6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS50Q96JG6 MIR3922-201ENST00000585192 84 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 OR1M4P-201ENST00000589199 287 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-6P-201ENST00000606623 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
VPS50Q96JG6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS50Q96JG6 AC233263.6-201ENST00000631132 1963 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.27□□□□□ -1.89
VPS50Q96JG6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VPS50Q96JG6 RNU6-778P-201ENST00000363269 103 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 SNORA38.1-201ENST00000364172 131 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 Y_RNA.259-201ENST00000364619 101 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 CD24P4-201ENST00000382840 243 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 RNU6-128P-201ENST00000383976 107 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 RNU6-1027P-201ENST00000383998 107 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 Y_RNA.460-201ENST00000384255 102 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 Y_RNA.473-201ENST00000384333 102 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 RPL21P3-201ENST00000395517 478 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AL360182.1-201ENST00000397433 468 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AL356057.2-201ENST00000403318 432 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 RPL5P18-201ENST00000406671 891 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 RNU6-370P-201ENST00000411008 104 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AL139396.1-201ENST00000421137 167 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AC093151.1-201ENST00000427711 313 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AL627311.1-201ENST00000431514 115 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS50Q96JG6 AC006028.1-201ENST00000438379 402 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AL078601.1-201ENST00000444542 271 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AC007677.1-201ENST00000445757 515 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 NDUFB1P2-201ENST00000449477 176 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AC146507.2-201ENST00000460608 476 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AC110794.1-201ENST00000505816 425 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AC069113.1-201ENST00000517763 267 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.27□□□□□ -1.89
VPS50Q96JG6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.27□□□□□ -1.89
VPS50Q96JG6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
VPS50Q96JG6 APOOP3-201ENST00000536787 586 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.27□□□□□ -1.89
VPS50Q96JG6 CYCSP39-201ENST00000565821 309 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AMZ2P1-203ENST00000565833 850 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AC078899.3-201ENST00000599065 212 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 MTND4LP5-201ENST00000605152 292 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 AL160413.1-201ENST00000622780 310 ntBASIC3.27□□□□□ -1.89
VPS50Q96JG6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
VPS50Q96JG6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
VPS50Q96JG6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
VPS50Q96JG6 Z83843.1-201ENST00000604070 3685 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
VPS50Q96JG6 RNU6-799P-201ENST00000363567 107 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 RNU6-1329P-201ENST00000365664 107 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 RNU6-1035P-201ENST00000384477 107 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 RNU6-658P-201ENST00000384606 106 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 RNU6-306P-201ENST00000384617 107 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 RNA5SP344-201ENST00000411081 104 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 AL356968.1-201ENST00000416622 474 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 AC016831.2-201ENST00000417179 352 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.26□□□□□ -1.89
VPS50Q96JG6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS50Q96JG6 RNU7-187P-201ENST00000458985 68 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 598.1 ms