Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 OSTCP8-201ENST00000445117 448 ntBASIC4.17□□□□□ -1.74
DDX11Q96FC9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX11Q96FC9 RNU7-170P-201ENST00000459303 61 ntBASIC4.17□□□□□ -1.74
DDX11Q96FC9 RPL21P10-201ENST00000463521 490 ntBASIC4.17□□□□□ -1.74
DDX11Q96FC9 AC105758.1-201ENST00000506038 399 ntBASIC4.17□□□□□ -1.74
DDX11Q96FC9 SNRPGP16-201ENST00000533275 226 ntBASIC4.17□□□□□ -1.74
DDX11Q96FC9 AC016727.2-201ENST00000603988 621 ntBASIC4.17□□□□□ -1.74
DDX11Q96FC9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX11Q96FC9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
DDX11Q96FC9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
DDX11Q96FC9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.17□□□□□ -1.74
DDX11Q96FC9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
DDX11Q96FC9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
DDX11Q96FC9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
DDX11Q96FC9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
DDX11Q96FC9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
DDX11Q96FC9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
DDX11Q96FC9 RNA5SP267-201ENST00000364893 126 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 Y_RNA.447-201ENST00000384184 113 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 RNU6-472P-201ENST00000384299 107 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 RNU4-70P-201ENST00000384579 139 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 RPL21P1-201ENST00000399532 476 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 MIR548I3-201ENST00000408378 149 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 MIR548I1-201ENST00000408810 149 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 RNA5SP129-201ENST00000410276 118 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 MTATP6P4-201ENST00000427725 675 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 RPS15AP10-201ENST00000432472 382 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX11Q96FC9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.16□□□□□ -1.74
DDX11Q96FC9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX11Q96FC9 RNU2-53P-201ENST00000516257 147 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 AP006245.1-201ENST00000522549 120 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 ZNF192P1-203ENST00000565888 810 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 AC109446.1-201ENST00000566172 220 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 MIR5047-201ENST00000579212 100 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 MIR4425-201ENST00000580572 84 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 RNU6-85P-201ENST00000605989 107 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.16□□□□□ -1.74
DDX11Q96FC9 U4.6-201ENST00000621618 127 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 AL360181.4-201ENST00000621752 134 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.16□□□□□ -1.74
DDX11Q96FC9 MIR4272-201ENST00000635924 64 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 MIR7153-201ENST00000637758 57 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
DDX11Q96FC9 OTUD4P1-201ENST00000237841 3067 ntBASIC4.16□□□□□ -1.74
DDX11Q96FC9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
DDX11Q96FC9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
DDX11Q96FC9 Y_RNA.210-201ENST00000364161 110 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 RNU6-173P-201ENST00000364215 104 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 RNU6-174P-201ENST00000410406 106 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX11Q96FC9 AL158156.1-201ENST00000422509 473 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 BX276092.3-201ENST00000424182 230 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 AL133396.1-201ENST00000432048 687 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 DYNLT3P2-201ENST00000442517 295 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 AC073910.1-201ENST00000445047 438 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 CEACAMP4-201ENST00000457676 421 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX11Q96FC9 AC114801.2-201ENST00000503825 781 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 RNU6-1143P-201ENST00000516125 104 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 SNORA40.14-201ENST00000516543 86 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 RNA5SP471-201ENST00000516971 106 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 RNU6-840P-201ENST00000517275 65 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX11Q96FC9 AC023157.2-201ENST00000540596 141 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX11Q96FC9 HSBP1P1-201ENST00000555205 166 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX11Q96FC9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX11Q96FC9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
DDX11Q96FC9 AL160281.1-201ENST00000605307 311 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 AC123912.5-201ENST00000605470 343 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 AC012531.5-201ENST00000611375 151 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 AL031601.2-202ENST00000622650 282 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX11Q96FC9 AC009812.4-201ENST00000569134 1805 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
DDX11Q96FC9 AC032011.1-201ENST00000611703 1549 ntBASIC4.15□□□□□ -1.75
DDX11Q96FC9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
DDX11Q96FC9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX11Q96FC9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX11Q96FC9 AC068647.1-201ENST00000489539 2265 ntBASIC4.14□□□□□ -1.75
DDX11Q96FC9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX11Q96FC9 Y_RNA.48-201ENST00000362710 103 ntBASIC4.14□□□□□ -1.75
DDX11Q96FC9 SNORD14.1-201ENST00000365609 90 ntBASIC4.14□□□□□ -1.75
DDX11Q96FC9 AL356968.1-201ENST00000416622 474 ntBASIC4.14□□□□□ -1.75
DDX11Q96FC9 ARL5AP4-201ENST00000430731 512 ntBASIC4.14□□□□□ -1.75
DDX11Q96FC9 AC011005.2-201ENST00000487324 359 ntBASIC4.14□□□□□ -1.75
DDX11Q96FC9 RPL17P19-201ENST00000489069 552 ntBASIC4.14□□□□□ -1.75
DDX11Q96FC9 RPL7P47-201ENST00000497299 556 ntBASIC4.14□□□□□ -1.75
DDX11Q96FC9 RNU1-86P-201ENST00000516108 154 ntBASIC4.14□□□□□ -1.75
DDX11Q96FC9 RNU1-107P-201ENST00000516617 154 ntBASIC4.14□□□□□ -1.75
DDX11Q96FC9 RNA5SP468-201ENST00000516782 93 ntBASIC4.14□□□□□ -1.75
DDX11Q96FC9 Y_RNA.715-201ENST00000517082 110 ntBASIC4.14□□□□□ -1.75
DDX11Q96FC9 AC069113.1-201ENST00000517763 267 ntBASIC4.14□□□□□ -1.75
DDX11Q96FC9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX11Q96FC9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX11Q96FC9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.14□□□□□ -1.75
DDX11Q96FC9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX11Q96FC9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms