Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 BTF3P4-201ENST00000418852 495 ntBASIC0.86□□□□□ -2.27
AP3S1Q92572 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.86□□□□□ -2.27
AP3S1Q92572 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.86□□□□□ -2.27
AP3S1Q92572 MTND2P4-201ENST00000445034 1004 ntBASIC0.86□□□□□ -2.27
AP3S1Q92572 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.86□□□□□ -2.27
AP3S1Q92572 RPL30P6-201ENST00000475925 342 ntBASIC0.86□□□□□ -2.27
AP3S1Q92572 RPF2P2-201ENST00000504693 896 ntBASIC0.86□□□□□ -2.27
AP3S1Q92572 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.86□□□□□ -2.27
AP3S1Q92572 SNORA31.19-201ENST00000517079 126 ntBASIC0.86□□□□□ -2.27
AP3S1Q92572 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.86□□□□□ -2.27
AP3S1Q92572 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.86□□□□□ -2.27
AP3S1Q92572 AC136932.1-201ENST00000574771 208 ntBASIC0.86□□□□□ -2.27
AP3S1Q92572 uc_338.12-201ENST00000616344 181 ntBASIC0.86□□□□□ -2.27
AP3S1Q92572 AL590240.4-201ENST00000616908 390 ntBASIC0.86□□□□□ -2.27
AP3S1Q92572 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
AP3S1Q92572 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.86□□□□□ -2.27
AP3S1Q92572 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
AP3S1Q92572 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
AP3S1Q92572 RNU5B-1-201ENST00000363286 116 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 Y_RNA.255-201ENST00000364581 97 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
AP3S1Q92572 RNU6-968P-201ENST00000384076 107 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 RNU6-296P-201ENST00000384608 107 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 MRPL35P1-201ENST00000404272 572 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 RPL21P90-201ENST00000415692 466 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 RAC1P6-201ENST00000423911 575 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 AC092634.2-201ENST00000428146 1010 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 AL592045.1-201ENST00000429867 352 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.85□□□□□ -2.27
AP3S1Q92572 PRPS1P1-201ENST00000445305 876 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.85□□□□□ -2.27
AP3S1Q92572 AC079776.3-201ENST00000450665 370 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 RPL9P9-202ENST00000466501 579 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.85□□□□□ -2.27
AP3S1Q92572 AC121161.1-201ENST00000510606 652 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 SNORD116-28-201ENST00000516123 91 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 RNU6-991P-201ENST00000516168 107 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 AP006587.4-201ENST00000526053 529 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 AP000873.5-201ENST00000533906 236 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.85□□□□□ -2.27
AP3S1Q92572 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.85□□□□□ -2.27
AP3S1Q92572 MIR4513-201ENST00000581077 86 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 BNIP3P30-201ENST00000601184 574 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 AC112220.2-201ENST00000605513 533 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 AL512598.1-201ENST00000610158 273 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 MIR8084-201ENST00000614105 89 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 AC068205.3-201ENST00000636385 468 ntBASIC0.85□□□□□ -2.27
AP3S1Q92572 DDX43P2-201ENST00000604753 1354 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 RNU4-38P-201ENST00000364472 129 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 RNU6-843P-201ENST00000384454 104 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 RNU6-360P-201ENST00000390944 104 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 UBE2V1P15-201ENST00000407776 448 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 AC069282.1-201ENST00000411911 526 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.84□□□□□ -2.27
AP3S1Q92572 CYCSP49-201ENST00000420810 319 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.84□□□□□ -2.27
AP3S1Q92572 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.84□□□□□ -2.27
AP3S1Q92572 RPL18AP17-201ENST00000455326 198 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 snoU13.15-201ENST00000459407 104 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 AC093852.1-201ENST00000503587 266 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.84□□□□□ -2.27
AP3S1Q92572 RNU6-548P-201ENST00000517083 115 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.84□□□□□ -2.27
AP3S1Q92572 DNAJC19P9-201ENST00000555084 351 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.84□□□□□ -2.27
AP3S1Q92572 BNIP3P9-201ENST00000603714 553 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 AC018926.1-201ENST00000616335 435 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 AC123767.1-202ENST00000620407 817 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 AC092656.1-203ENST00000624134 423 ntBASIC0.84□□□□□ -2.27
AP3S1Q92572 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.84□□□□□ -2.27
AP3S1Q92572 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.84□□□□□ -2.27
AP3S1Q92572 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
AP3S1Q92572 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
AP3S1Q92572 RNU6-744P-201ENST00000365557 107 ntBASIC0.83□□□□□ -2.28
AP3S1Q92572 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
AP3S1Q92572 RNU6-1316P-201ENST00000384242 108 ntBASIC0.83□□□□□ -2.28
AP3S1Q92572 SNORA40C-201ENST00000391285 128 ntBASIC0.83□□□□□ -2.28
AP3S1Q92572 UBE2V1P10-201ENST00000414685 269 ntBASIC0.83□□□□□ -2.28
AP3S1Q92572 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.83□□□□□ -2.28
AP3S1Q92572 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.83□□□□□ -2.28
AP3S1Q92572 OR2AQ1P-201ENST00000451972 200 ntBASIC0.83□□□□□ -2.28
AP3S1Q92572 AC130509.1-201ENST00000464158 433 ntBASIC0.83□□□□□ -2.28
AP3S1Q92572 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.83□□□□□ -2.28
AP3S1Q92572 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.83□□□□□ -2.28
AP3S1Q92572 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.83□□□□□ -2.28
AP3S1Q92572 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.83□□□□□ -2.28
AP3S1Q92572 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
AP3S1Q92572 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
AP3S1Q92572 AF131215.7-201ENST00000602443 707 ntBASIC0.83□□□□□ -2.28
AP3S1Q92572 AL356094.1-201ENST00000624663 1212 ntBASIC0.83□□□□□ -2.28
AP3S1Q92572 AP003485.1-201ENST00000625093 753 ntBASIC0.83□□□□□ -2.28
AP3S1Q92572 RPL23AP32-201ENST00000395315 459 ntBASIC0.82□□□□□ -2.28
AP3S1Q92572 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.82□□□□□ -2.28
AP3S1Q92572 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.82□□□□□ -2.28
AP3S1Q92572 AL669831.1-202ENST00000428504 417 ntBASIC0.82□□□□□ -2.28
AP3S1Q92572 AL513124.1-201ENST00000450410 614 ntBASIC0.82□□□□□ -2.28
AP3S1Q92572 RPL39P36-201ENST00000490784 156 ntBASIC0.82□□□□□ -2.28
AP3S1Q92572 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.82□□□□□ -2.28
AP3S1Q92572 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms