Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM41Q8WV44 LAP3P1-201ENST00000403648 294 ntBASIC7.11□□□□□ -1.27
TRIM41Q8WV44 RNU6ATAC10P-201ENST00000408635 111 ntBASIC7.11□□□□□ -1.27
TRIM41Q8WV44 AL627311.1-201ENST00000431514 115 ntBASIC7.11□□□□□ -1.27
TRIM41Q8WV44 RPS15AP7-201ENST00000439294 405 ntBASIC7.11□□□□□ -1.27
TRIM41Q8WV44 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM41Q8WV44 RPS29P19-201ENST00000479709 171 ntBASIC7.11□□□□□ -1.27
TRIM41Q8WV44 AC091959.1-201ENST00000495857 238 ntBASIC7.11□□□□□ -1.27
TRIM41Q8WV44 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM41Q8WV44 EIF4BP1-201ENST00000554881 351 ntBASIC7.11□□□□□ -1.27
TRIM41Q8WV44 AC233702.9-201ENST00000581528 203 ntBASIC7.11□□□□□ -1.27
TRIM41Q8WV44 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM41Q8WV44 MIR4282-201ENST00000583613 67 ntBASIC7.11□□□□□ -1.27
TRIM41Q8WV44 AC005046.1-201ENST00000608515 625 ntBASIC7.11□□□□□ -1.27
TRIM41Q8WV44 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM41Q8WV44 AC108706.1-201ENST00000611053 297 ntBASIC7.11□□□□□ -1.27
TRIM41Q8WV44 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM41Q8WV44 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
TRIM41Q8WV44 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM41Q8WV44 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM41Q8WV44 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM41Q8WV44 SDAD1P2-201ENST00000441308 2028 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM41Q8WV44 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TRIM41Q8WV44 Y_RNA.272-201ENST00000364696 102 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 U8.11-201ENST00000384699 133 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 U8.12-201ENST00000384701 133 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 RN7SKP156-201ENST00000410308 342 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 RNU5A-5P-201ENST00000411054 116 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM41Q8WV44 MTCO1P39-201ENST00000426148 480 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 AC009296.1-201ENST00000443146 155 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 CYCSP35-201ENST00000451978 304 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 RNA5SP246-201ENST00000458909 119 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 U8.18-201ENST00000459285 133 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 snoU13.3-201ENST00000459441 104 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 AC140059.1-201ENST00000489238 361 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM41Q8WV44 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM41Q8WV44 MTND1P7-201ENST00000632801 297 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 LINC01109-201ENST00000603837 3081 ntBASIC7.1□□□□□ -1.27
TRIM41Q8WV44 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM41Q8WV44 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
TRIM41Q8WV44 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
TRIM41Q8WV44 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 RNU6-1130P-201ENST00000365434 107 ntBASIC7.09□□□□□ -1.27
TRIM41Q8WV44 RNU6-1074P-201ENST00000383995 104 ntBASIC7.09□□□□□ -1.27
TRIM41Q8WV44 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 AC108145.1-201ENST00000503770 153 ntBASIC7.09□□□□□ -1.27
TRIM41Q8WV44 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC7.09□□□□□ -1.27
TRIM41Q8WV44 IGHVIII-44-202ENST00000636235 289 ntBASIC7.09□□□□□ -1.27
TRIM41Q8WV44 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM41Q8WV44 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
TRIM41Q8WV44 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 RNU5E-7P-201ENST00000365290 117 ntBASIC7.08□□□□□ -1.28
TRIM41Q8WV44 RNU6-318P-201ENST00000384283 103 ntBASIC7.08□□□□□ -1.28
TRIM41Q8WV44 SNORA70E-201ENST00000384492 135 ntBASIC7.08□□□□□ -1.28
TRIM41Q8WV44 MIR34A-201ENST00000385130 110 ntBASIC7.08□□□□□ -1.28
TRIM41Q8WV44 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 RPS4XP3-201ENST00000398541 413 ntBASIC7.08□□□□□ -1.28
TRIM41Q8WV44 SNORD12B-201ENST00000410433 91 ntBASIC7.08□□□□□ -1.28
TRIM41Q8WV44 AC024067.1-201ENST00000426199 223 ntBASIC7.08□□□□□ -1.28
TRIM41Q8WV44 AC007560.1-201ENST00000426912 237 ntBASIC7.08□□□□□ -1.28
TRIM41Q8WV44 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 RPL21P9-201ENST00000556149 474 ntBASIC7.08□□□□□ -1.28
TRIM41Q8WV44 AC022655.2-201ENST00000577280 318 ntBASIC7.08□□□□□ -1.28
TRIM41Q8WV44 MIR4308-201ENST00000580634 81 ntBASIC7.08□□□□□ -1.28
TRIM41Q8WV44 AC010928.2-201ENST00000588017 287 ntBASIC7.08□□□□□ -1.28
TRIM41Q8WV44 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 AC009541.1-201ENST00000438279 2662 ntBASIC7.08□□□□□ -1.28
TRIM41Q8WV44 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM41Q8WV44 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM41Q8WV44 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC7.07□□□□□ -1.28
TRIM41Q8WV44 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM41Q8WV44 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms