Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 MTND5P30-201ENST00000452896 1731 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 RNU6-61P-201ENST00000365528 109 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 RNU6-641P-201ENST00000384006 107 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 RNU6-297P-201ENST00000384636 107 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 RNU6-748P-201ENST00000384648 107 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 SNORA40.3-201ENST00000390964 122 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 CISD1P1-201ENST00000393907 327 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AL133475.1-201ENST00000404414 305 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 CIR1P3-201ENST00000405137 479 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 RNU2-8P-201ENST00000410727 190 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AL160275.3-201ENST00000423876 471 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 RPS6P15-201ENST00000431996 751 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 MTATP6P16-201ENST00000434543 526 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AC009961.2-201ENST00000435771 251 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AC003071.1-201ENST00000451219 789 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 MTCYBP1-201ENST00000454315 1119 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 BTF3P15-201ENST00000455606 336 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 RN7SKP210-201ENST00000459176 261 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 RBBP4P6-201ENST00000508098 202 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AC117522.1-201ENST00000509821 380 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 Y_RNA.676-201ENST00000516393 96 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AC135279.1-201ENST00000543493 504 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 OR11H5P-201ENST00000554039 926 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AL158211.1-201ENST00000566763 763 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 MIR5571-201ENST00000577998 113 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AC008521.1-201ENST00000587471 187 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 NIFKP6-201ENST00000598115 845 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AC090578.1-201ENST00000604955 591 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.67□□□□□ -2.14
LINC01560Q8TB33 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AL139276.1-201ENST00000311910 1001 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 Y_RNA.164-201ENST00000363709 102 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 SNORA67.1-201ENST00000364749 141 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 RNA5SP125-201ENST00000364843 120 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 MIR578-201ENST00000384828 96 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 FTH1P15-201ENST00000406984 280 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 Y_RNA.595-201ENST00000410403 105 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 ISCA1P6-201ENST00000427740 390 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 GAPDHP17-201ENST00000449858 1001 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 SNRPGP9-201ENST00000456025 225 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 SNRPFP4-201ENST00000456366 242 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AC112206.3-201ENST00000514578 389 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 Vault.3-201ENST00000516676 95 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 IGLV3-17-201ENST00000519099 244 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AC090572.1-201ENST00000519251 160 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01560Q8TB33 ADI1P3-201ENST00000549509 470 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AC092325.1-201ENST00000566449 554 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AC012213.3-201ENST00000577199 777 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AC105245.1-201ENST00000581934 244 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AC016727.1-205ENST00000605437 569 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AL139286.2-201ENST00000606838 396 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AC069294.1-201ENST00000608397 350 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 MIR8081-201ENST00000611533 95 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 MIR6895-201ENST00000613497 78 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AC108479.2-201ENST00000617314 601 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AC024581.2-201ENST00000619986 252 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AC138627.2-201ENST00000624202 601 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 AL157786.1-207ENST00000627771 695 ntBASIC1.66□□□□□ -2.14
LINC01560Q8TB33 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.14
LINC01560Q8TB33 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 RNY1P12-201ENST00000364251 105 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 RNA5SP160-201ENST00000364866 120 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AL049545.1-201ENST00000401856 572 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms