Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 RNU6-1097P-201ENST00000363586 107 ntBASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 RNU6-1083P-201ENST00000384022 107 ntBASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 AL365496.1-201ENST00000426885 215 ntBASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 MTCYBP34-201ENST00000439552 670 ntBASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 SPINT5P-201ENST00000448174 155 ntBASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 SNRPGP6-201ENST00000451124 220 ntBASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 HSPE1P13-201ENST00000451143 297 ntBASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 AC104417.1-201ENST00000523974 751 ntBASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 AL136520.1-202ENST00000555494 763 ntBASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 AC091489.2-201ENST00000566263 604 ntBASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 AL021997.1-201ENST00000605757 193 ntBASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 AC098614.4-201ENST00000607601 462 ntBASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 AC092192.1-201ENST00000633154 1018 ntBASIC0.05□□□□□ -2.4
CCDC168Q8NDH2 SNORA25.3-201ENST00000363205 127 ntBASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 SNORA40.19-201ENST00000390846 128 ntBASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 AL589994.1-201ENST00000404962 340 ntBASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 AC015908.1-201ENST00000478739 476 ntBASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 AC069304.3-201ENST00000603938 1084 ntBASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 Y_RNA.778-201ENST00000620203 90 ntBASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 RNU6-348P-201ENST00000384386 107 ntBASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 MIR19B1-201ENST00000384829 87 ntBASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 BTF3P11-201ENST00000426582 477 ntBASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 AC018659.1-201ENST00000551083 169 ntBASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 PART1_2.1-201ENST00000612397 250 ntBASIC0.04□□□□□ -2.4
CCDC168Q8NDH2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.03□□□□□ -2.4
CCDC168Q8NDH2 RNU6-271P-201ENST00000363858 105 ntBASIC0.03□□□□□ -2.4
CCDC168Q8NDH2 RNU6-968P-201ENST00000384076 107 ntBASIC0.03□□□□□ -2.4
CCDC168Q8NDH2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
CCDC168Q8NDH2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.03□□□□□ -2.4
CCDC168Q8NDH2 AC006512.1-201ENST00000468816 291 ntBASIC0.03□□□□□ -2.4
CCDC168Q8NDH2 BET1P1-201ENST00000482276 359 ntBASIC0.03□□□□□ -2.4
CCDC168Q8NDH2 SCARNA3-201ENST00000517097 143 ntBASIC0.03□□□□□ -2.4
CCDC168Q8NDH2 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.03□□□□□ -2.4
CCDC168Q8NDH2 AL356432.3-201ENST00000568952 465 ntBASIC0.03□□□□□ -2.4
CCDC168Q8NDH2 MTCO2P2-201ENST00000591258 225 ntBASIC0.03□□□□□ -2.4
CCDC168Q8NDH2 AL138478.1-201ENST00000612252 832 ntBASIC0.03□□□□□ -2.4
CCDC168Q8NDH2 MIR605-201ENST00000385078 83 ntBASIC0.03□□□□□ -2.41
CCDC168Q8NDH2 AL136372.1-201ENST00000403060 228 ntBASIC0.03□□□□□ -2.41
CCDC168Q8NDH2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.03□□□□□ -2.41
CCDC168Q8NDH2 AC244505.3-201ENST00000454598 187 ntBASIC0.03□□□□□ -2.41
CCDC168Q8NDH2 snoU13.28-201ENST00000459235 104 ntBASIC0.03□□□□□ -2.41
CCDC168Q8NDH2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.03□□□□□ -2.41
CCDC168Q8NDH2 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
CCDC168Q8NDH2 MIR3609-201ENST00000582661 80 ntBASIC0.03□□□□□ -2.41
CCDC168Q8NDH2 AL591926.4-201ENST00000616895 298 ntBASIC0.03□□□□□ -2.41
CCDC168Q8NDH2 AC008147.4-201ENST00000617570 1204 ntBASIC0.03□□□□□ -2.41
CCDC168Q8NDH2 AL391597.1-201ENST00000618707 694 ntBASIC0.03□□□□□ -2.41
CCDC168Q8NDH2 AC009509.4-201ENST00000619202 509 ntBASIC0.03□□□□□ -2.41
CCDC168Q8NDH2 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 RPL26P27-201ENST00000414397 437 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 PTGES3P4-201ENST00000426243 356 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 OR51AB1P-201ENST00000429046 620 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 snoU13.25-201ENST00000458945 104 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 AL163195.1-201ENST00000496941 348 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 HMGB1P35-201ENST00000503360 598 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 OR8K2P-201ENST00000524645 927 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 AC093023.1-201ENST00000547375 507 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 RNU6-1237P-201ENST00000384777 107 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 AC069282.1-201ENST00000411911 526 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 SNORD126-201ENST00000459475 77 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 AC136618.2-201ENST00000575091 400 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 MIR3678-201ENST00000578455 94 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 AC105224.1-201ENST00000587055 421 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 SNRPGP20-201ENST00000604477 205 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 AC010738.1-201ENST00000604970 987 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 AC105129.3-201ENST00000605455 485 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 MIR8074-201ENST00000615081 81 ntBASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.02□□□□□ -2.41
CCDC168Q8NDH2 AC005832.2-201ENST00000538921 1430 ntBASIC0.01□□□□□ -2.41
CCDC168Q8NDH2 RNU6-514P-201ENST00000384208 107 ntBASIC0.01□□□□□ -2.41
CCDC168Q8NDH2 MIR496-201ENST00000385226 102 ntBASIC0.01□□□□□ -2.41
CCDC168Q8NDH2 RPL7L1P10-201ENST00000427790 463 ntBASIC0.01□□□□□ -2.41
CCDC168Q8NDH2 HMGN2P34-201ENST00000437647 269 ntBASIC0.01□□□□□ -2.41
CCDC168Q8NDH2 AP000797.1-201ENST00000478870 387 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms