Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 MAPK10-303ENST00000641324 3959 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 RNU1-94P-201ENST00000362627 173 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 U8.4-201ENST00000363626 134 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 Y_RNA.304-201ENST00000365011 112 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 SNORA56-201ENST00000383966 129 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 Y_RNA.498-201ENST00000384460 102 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 MIR613-201ENST00000385248 95 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 EI24P2-201ENST00000397776 1076 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 U3.36-201ENST00000408418 213 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 AC093162.1-201ENST00000419682 124 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 AC000111.2-201ENST00000448200 210 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 AC091021.1-201ENST00000468051 388 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 AIG1P1-201ENST00000503376 148 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 RN7SKP260-201ENST00000516907 149 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 RNA5SP373-201ENST00000517271 95 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 MRPS18CP4-201ENST00000535821 231 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 AC092490.3-201ENST00000545370 572 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 AC055872.1-201ENST00000570978 278 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 MIR5692C2-201ENST00000577959 77 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 MIR6076-201ENST00000617521 113 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 AP002799.1-201ENST00000623552 423 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 SNORD98-201ENST00000636377 67 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DEPDC4Q8N2C3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 AL445487.1-201ENST00000415694 1580 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 RNU6-799P-201ENST00000363567 107 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 Y_RNA.262-201ENST00000364641 102 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 RNU6-748P-201ENST00000384648 107 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 RNU6-1248P-201ENST00000391096 64 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 AL512633.1-201ENST00000399931 655 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 RNU6-394P-201ENST00000410735 107 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 RAB28P5-201ENST00000427490 651 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 AL691482.1-201ENST00000453255 87 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 RN7SL517P-201ENST00000462240 305 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 AC009127.1-201ENST00000467090 155 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 RPS29P26-201ENST00000477483 171 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 AC105137.2-201ENST00000569073 466 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 MIR3691-201ENST00000578066 90 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 SNRPGP20-201ENST00000604477 205 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 AC068831.7-201ENST00000616954 363 ntBASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
DEPDC4Q8N2C3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 RNA5SP240-201ENST00000365355 128 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 U3.26-201ENST00000391236 204 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 HSPE1P26-201ENST00000405341 275 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 AL591034.1-201ENST00000407447 340 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 ELOCP21-201ENST00000412558 336 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 AC245291.1-201ENST00000419501 328 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 AL450023.3-201ENST00000440592 271 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 AC107626.1-201ENST00000471084 183 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 AC091179.3-201ENST00000474761 144 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 AL121594.1-201ENST00000475906 575 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 RNU7-200P-201ENST00000516105 62 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 RNU6-191P-201ENST00000516295 94 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 HMGN2P15-201ENST00000585707 270 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 AC011447.4-201ENST00000587562 111 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 AC006116.3-201ENST00000592968 361 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 RPL7P50-201ENST00000600588 727 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 HSPE1P7-201ENST00000604681 321 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 AC087783.2-201ENST00000605070 562 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms