Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 Z69720.2-201ENST00000624755 279 ntBASIC3.83□□□□□ -1.8
SYNE4Q8N205 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.83□□□□□ -1.8
SYNE4Q8N205 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SYNE4Q8N205 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.83□□□□□ -1.8
SYNE4Q8N205 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNE4Q8N205 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNE4Q8N205 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.83□□□□□ -1.8
SYNE4Q8N205 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SYNE4Q8N205 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SYNE4Q8N205 AC009812.4-201ENST00000569134 1805 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 AC073325.2-201ENST00000339545 159 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 Y_RNA.80-201ENST00000362996 102 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 Y_RNA.485-201ENST00000384395 102 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 RNU6-14P-201ENST00000384630 106 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 SNORA75.6-201ENST00000391318 127 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 RPS4XP7-201ENST00000406274 780 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 AL139281.1-201ENST00000422120 335 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 MTATP6P4-201ENST00000427725 675 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 USP9YP16-201ENST00000430287 407 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.82□□□□□ -1.8
SYNE4Q8N205 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 USP9YP23-201ENST00000455085 407 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 HMGN2P7-201ENST00000456186 273 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 AC117440.1-201ENST00000474107 571 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNE4Q8N205 YWHAEP4-201ENST00000505390 198 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 Y_RNA.689-201ENST00000516589 107 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 RNU6-794P-201ENST00000517261 64 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 AC087854.1-201ENST00000519706 414 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SYNE4Q8N205 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNE4Q8N205 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SYNE4Q8N205 U2.17-201ENST00000611454 95 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 U4.1-201ENST00000620349 87 ntBASIC3.82□□□□□ -1.8
SYNE4Q8N205 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SYNE4Q8N205 USP8P1-201ENST00000494673 3183 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SYNE4Q8N205 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.81□□□□□ -1.8
SYNE4Q8N205 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.81□□□□□ -1.8
SYNE4Q8N205 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.81□□□□□ -1.8
SYNE4Q8N205 AL359693.1-201ENST00000614959 2407 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 SNORD3E-201ENST00000362899 217 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 RNU6-450P-201ENST00000364654 107 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 AC117470.1-201ENST00000381974 330 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 Y_RNA.399-201ENST00000383955 105 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 RNU6-76P-201ENST00000384060 104 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 SNORA18.3-201ENST00000384122 132 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 RNU6-393P-201ENST00000384475 107 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 RNU6-328P-201ENST00000390887 106 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 MIR1183-201ENST00000408856 89 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 RNU6-387P-201ENST00000411331 105 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 AC080125.1-201ENST00000414888 684 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 AC008267.5-201ENST00000424928 265 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 MTCO1P39-201ENST00000426148 480 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 USP9YP30-201ENST00000430729 455 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 AL121890.1-201ENST00000435457 205 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 RPL26P6-201ENST00000440913 438 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 AL121871.1-201ENST00000443413 436 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 AC108938.1-201ENST00000451204 136 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 RNU7-167P-201ENST00000459160 62 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 U8.20-201ENST00000459445 131 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.81□□□□□ -1.8
SYNE4Q8N205 SNORA25.10-201ENST00000515926 124 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 SCARNA16.2-201ENST00000516520 172 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 RNU6-323P-201ENST00000521915 107 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 MTCO3P23-201ENST00000561363 289 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.81□□□□□ -1.8
SYNE4Q8N205 AC113195.1-201ENST00000579952 141 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.81□□□□□ -1.8
SYNE4Q8N205 AL442067.1-201ENST00000613261 223 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 AC133104.2-201ENST00000615272 193 ntBASIC3.81□□□□□ -1.8
SYNE4Q8N205 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.81□□□□□ -1.8
SYNE4Q8N205 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SYNE4Q8N205 AL672296.1-201ENST00000427780 2158 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SYNE4Q8N205 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SYNE4Q8N205 AC138393.1-203ENST00000327086 343 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 Y_RNA.149-201ENST00000363558 117 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 RNU6-593P-201ENST00000364716 112 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 MIR1302-3-201ENST00000408128 138 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 MRPS18CP6-201ENST00000423587 223 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 AC096644.2-201ENST00000429278 159 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.8□□□□□ -1.8
SYNE4Q8N205 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.8□□□□□ -1.8
SYNE4Q8N205 SNAP23P1-201ENST00000433229 246 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.8□□□□□ -1.8
SYNE4Q8N205 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.8□□□□□ -1.8
SYNE4Q8N205 RPS24P6-201ENST00000452670 400 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 TRBV12-1-201ENST00000479785 344 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.8□□□□□ -1.8
SYNE4Q8N205 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.8□□□□□ -1.8
SYNE4Q8N205 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.8□□□□□ -1.8
SYNE4Q8N205 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.8□□□□□ -1.8
SYNE4Q8N205 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.8□□□□□ -1.8
SYNE4Q8N205 RNU1-143P-201ENST00000516296 146 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 Y_RNA.708-201ENST00000516950 96 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 AC011602.1-201ENST00000546484 331 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 AC005951.2-201ENST00000576282 495 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms