Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 SAR1AP2-201ENST00000392696 594 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 RNA5SP44-201ENST00000410446 133 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 RPS26P21-201ENST00000475397 348 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 SNORD19.2-201ENST00000516978 73 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 MIR5701-3-201ENST00000578890 82 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 MIR5701-1-201ENST00000585138 82 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 AC010900.2-201ENST00000604508 210 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 MIR5701-2-201ENST00000615634 82 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 AC039056.2-201ENST00000622261 511 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 AC016588.2-201ENST00000632484 3021 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 AC233981.2-201ENST00000611524 1614 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 RNU6-212P-201ENST00000362642 104 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 Y_RNA.785-201ENST00000384290 109 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 AC074117.2-201ENST00000417130 397 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 RPL21P38-201ENST00000418090 167 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 AL445584.1-201ENST00000431451 330 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 RPS15AP5-201ENST00000436276 388 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 AL133547.1-201ENST00000448546 220 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 AC079354.2-201ENST00000453523 154 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 AC010099.1-201ENST00000455434 375 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 snoU13.22-201ENST00000459428 104 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 AC107626.1-201ENST00000471084 183 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 AC098869.1-201ENST00000481627 292 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 RNU7-175P-201ENST00000515915 61 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 RNU6-581P-201ENST00000516214 105 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 AC120057.2-201ENST00000571520 271 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 AL672167.1-203ENST00000641299 2975 ntBASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.48□□□□□ -1.69
NPAS4Q8IUM7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 SNORA60-201ENST00000362396 134 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 RNU4-50P-201ENST00000364361 141 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 RNU6-968P-201ENST00000384076 107 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 Y_RNA.518-201ENST00000384552 113 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 Y_RNA.539-201ENST00000384635 107 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 MIR200C-201ENST00000384980 68 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 SNORA69.1-201ENST00000390904 137 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 MTCO2P33-201ENST00000402100 465 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 RNU6-121P-201ENST00000410525 99 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 RNU2-14P-201ENST00000411053 191 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 MTCO3P19-201ENST00000415864 321 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 AL691449.1-201ENST00000426570 421 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 AL161651.1-201ENST00000440882 223 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 AC006011.1-201ENST00000442758 349 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 AC097462.2-201ENST00000504623 481 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 Y_RNA.706-201ENST00000516933 99 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 SNORA81.3-201ENST00000517283 198 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 AC073410.2-201ENST00000603240 332 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 CR392039.5-201ENST00000623201 510 ntBASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
NPAS4Q8IUM7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 Y_RNA.20-201ENST00000362479 113 ntBASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 RNU4-9P-201ENST00000364951 139 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 441.1 ms