| HOOK3 | Q86VS8 | RNU6-487P-201 | ENST00000365430 | 104 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | RNU6-843P-201 | ENST00000384454 | 104 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | MIR1-2-201 | ENST00000384961 | 85 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | AC093382.1-201 | ENST00000413311 | 379 nt | TSL 5 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | AC000111.3-201 | ENST00000433478 | 193 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | CALM1P1-201 | ENST00000442082 | 433 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | AC079448.1-201 | ENST00000449377 | 373 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | PCDH9-AS4-201 | ENST00000456459 | 436 nt | TSL 3 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | RNU7-182P-201 | ENST00000459009 | 62 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | AC104663.1-201 | ENST00000508555 | 557 nt | TSL 2 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | AC010486.3-201 | ENST00000511602 | 785 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | RNA5SP148-201 | ENST00000516527 | 94 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | Y_RNA.687-201 | ENST00000516558 | 91 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | AC113145.1-201 | ENST00000522408 | 412 nt | TSL 5 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | CR383656.8-201 | ENST00000549046 | 145 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | AC090049.1-201 | ENST00000551075 | 1011 nt | TSL 3 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | LINC02305-201 | ENST00000554142 | 476 nt | TSL 3 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | AC136619.2-201 | ENST00000563361 | 631 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | MIR3913-1-201 | ENST00000577744 | 102 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | MIR4775-201 | ENST00000581168 | 75 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | BNIP3P30-201 | ENST00000601184 | 574 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | AC087752.4-201 | ENST00000605911 | 462 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | AC005332.10-201 | ENST00000612725 | 619 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | AC009233.1-201 | ENST00000616477 | 371 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | RMST_4.1-201 | ENST00000616886 | 107 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | AC072046.2-201 | ENST00000618366 | 268 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | AC023490.3-201 | ENST00000621762 | 358 nt | TSL 3 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | AP000550.4-201 | ENST00000639507 | 358 nt | TSL 3 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | RBBP8P1-201 | ENST00000449447 | 1844 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOOK3 | Q86VS8 | ESF1-202 | ENST00000617257 | 1470 nt | TSL 5 BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AKAP7-209 | ENST00000541650 | 2008 nt | TSL 5 BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | RNU6-282P-201 | ENST00000365357 | 103 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | RNU6-116P-201 | ENST00000384042 | 109 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | RNU6-550P-201 | ENST00000391057 | 101 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | BCL2L15-203 | ENST00000393320 | 276 nt | TSL 1 (best) BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | FGFR1OP2P1-201 | ENST00000395943 | 500 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AL359511.1-201 | ENST00000402970 | 211 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | LINC01312-201 | ENST00000412745 | 775 nt | TSL 3 BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | MORF4L1P6-201 | ENST00000418771 | 268 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC006041.1-201 | ENST00000425322 | 328 nt | TSL 3 BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AL354936.1-201 | ENST00000441521 | 649 nt | TSL 5 BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC099566.1-201 | ENST00000442558 | 479 nt | TSL 3 BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | MTND2P4-201 | ENST00000445034 | 1004 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC004936.1-201 | ENST00000451755 | 361 nt | TSL 3 BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | MIR4435-2HG-213 | ENST00000451884 | 423 nt | TSL 3 BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC022364.2-201 | ENST00000457963 | 554 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC117460.1-201 | ENST00000508964 | 467 nt | TSL 3 BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AF213884.2-201 | ENST00000510417 | 903 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | RNU1-86P-201 | ENST00000516108 | 154 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | RNA5SP320-201 | ENST00000516263 | 124 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | RNU1-107P-201 | ENST00000516617 | 154 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | LINC02545-201 | ENST00000525381 | 306 nt | TSL 3 BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC105137.2-201 | ENST00000569073 | 466 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | MTCYBP33-201 | ENST00000575007 | 1130 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | MIR4435-1-201 | ENST00000582552 | 80 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC002115.1-201 | ENST00000589603 | 568 nt | TSL 4 BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC007621.1-201 | ENST00000604544 | 437 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC079610.3-201 | ENST00000606960 | 147 nt | TSL 3 BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC099842.1-201 | ENST00000619919 | 596 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | Z69908.1-201 | ENST00000622603 | 247 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC097520.1-201 | ENST00000624435 | 385 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | SEPT14P19-203 | ENST00000633205 | 211 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | OR2L2-202 | ENST00000641771 | 4300 nt | APPRIS P1 BASIC | 2.46 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | MIER3-204 | ENST00000381226 | 5210 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | PTPRQ-209 | ENST00000616559 | 8165 nt | TSL 5 BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | RICTOR-202 | ENST00000357387 | 9543 nt | APPRIS P1 TSL 1 (best) BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | ZNF720P1-201 | ENST00000562403 | 1939 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | OR4G2P-201 | ENST00000328113 | 903 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | RNU6-1287P-201 | ENST00000362914 | 107 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | RNU6-181P-201 | ENST00000363225 | 107 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | SNORA6-201 | ENST00000384033 | 151 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | RNU6-456P-201 | ENST00000384493 | 107 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | RNU6-1060P-201 | ENST00000384664 | 107 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | MIR518C-201 | ENST00000384822 | 101 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | MTND1P23-201 | ENST00000416931 | 372 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AL121872.1-201 | ENST00000420327 | 281 nt | TSL 5 BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | EIF4EP4-201 | ENST00000424916 | 578 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AL136234.1-201 | ENST00000437080 | 349 nt | TSL 2 BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | USP9YP29-201 | ENST00000445112 | 563 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC012308.1-201 | ENST00000451232 | 178 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | KLF3P2-201 | ENST00000465138 | 268 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | ARL2BPP4-201 | ENST00000506854 | 471 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC117522.2-201 | ENST00000510049 | 657 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC097460.1-201 | ENST00000514624 | 590 nt | TSL 3 BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | RNU4-29P-201 | ENST00000515943 | 174 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | RNU6-445P-201 | ENST00000516949 | 107 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC027176.1-201 | ENST00000560204 | 514 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | MIR5694-201 | ENST00000581190 | 76 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | RNASEH2B-AS1-206 | ENST00000601286 | 657 nt | TSL 5 BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC068790.2-201 | ENST00000602601 | 557 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC025811.1-201 | ENST00000604312 | 472 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | Z84480.1-201 | ENST00000605131 | 311 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AL138963.2-201 | ENST00000605137 | 226 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AC021646.1-201 | ENST00000605469 | 484 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AL121917.1-203 | ENST00000605534 | 577 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | MIR5739-201 | ENST00000619803 | 80 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | AL353651.2-201 | ENST00000635706 | 559 nt | TSL 5 BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | ATM-228 | ENST00000639240 | 498 nt | TSL 5 BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | ATM-230 | ENST00000640388 | 578 nt | TSL 5 BASIC | 2.45 | □□□□□ -2.02 | | |
| HOOK3 | Q86VS8 | LRIF1-203 | ENST00000494675 | 1912 nt | APPRIS ALT2 TSL 2 BASIC | 2.44 | □□□□□ -2.02 | | |