Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC093788.1-201ENST00000609356 927 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 AC244517.12-201ENST00000623581 663 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PRPF39Q86UA1 MTND4P14-201ENST00000435799 1354 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.71□□□□□ -1.98
PRPF39Q86UA1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PRPF39Q86UA1 SNORA25.6-201ENST00000364121 118 ntBASIC2.7□□□□□ -1.98
PRPF39Q86UA1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PRPF39Q86UA1 RNA5SP210-201ENST00000391034 120 ntBASIC2.7□□□□□ -1.98
PRPF39Q86UA1 MTATP6P26-201ENST00000445926 662 ntBASIC2.7□□□□□ -1.98
PRPF39Q86UA1 AC073901.1-201ENST00000462471 408 ntBASIC2.7□□□□□ -1.98
PRPF39Q86UA1 RN7SL429P-201ENST00000479090 223 ntBASIC2.7□□□□□ -1.98
PRPF39Q86UA1 RN7SL489P-201ENST00000486185 223 ntBASIC2.7□□□□□ -1.98
PRPF39Q86UA1 RN7SL327P-201ENST00000488659 223 ntBASIC2.7□□□□□ -1.98
PRPF39Q86UA1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.7□□□□□ -1.98
PRPF39Q86UA1 AC018437.1-201ENST00000492214 406 ntBASIC2.7□□□□□ -1.98
PRPF39Q86UA1 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PRPF39Q86UA1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PRPF39Q86UA1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.7□□□□□ -1.98
PRPF39Q86UA1 AC079598.5-201ENST00000547460 117 ntBASIC2.7□□□□□ -1.98
PRPF39Q86UA1 AC021646.1-201ENST00000605469 484 ntBASIC2.7□□□□□ -1.98
PRPF39Q86UA1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.7□□□□□ -1.98
PRPF39Q86UA1 AC007684.1-201ENST00000609671 477 ntBASIC2.7□□□□□ -1.98
PRPF39Q86UA1 RN7SL853P-201ENST00000617250 223 ntBASIC2.7□□□□□ -1.98
PRPF39Q86UA1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PRPF39Q86UA1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PRPF39Q86UA1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
PRPF39Q86UA1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.69□□□□□ -1.98
PRPF39Q86UA1 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PRPF39Q86UA1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.69□□□□□ -1.98
PRPF39Q86UA1 Z82195.2-201ENST00000612348 18351 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 RNA5SP125-201ENST00000364843 120 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.69□□□□□ -1.98
PRPF39Q86UA1 DEFB108C-201ENST00000400154 252 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 RPS4XP7-201ENST00000406274 780 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 RNU2-63P-201ENST00000410792 194 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.69□□□□□ -1.98
PRPF39Q86UA1 RPS3AP44-201ENST00000425466 790 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 Z83846.1-201ENST00000446798 265 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 RNU7-63P-201ENST00000459054 62 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 AC133134.1-201ENST00000466800 359 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
PRPF39Q86UA1 RNU4-29P-201ENST00000515943 174 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 AP003392.2-201ENST00000527269 208 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 BNIP3P6-201ENST00000549284 499 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 AC105137.2-201ENST00000569073 466 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.69□□□□□ -1.98
PRPF39Q86UA1 MIR4635-201ENST00000583759 79 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.69□□□□□ -1.98
PRPF39Q86UA1 AC009509.4-201ENST00000619202 509 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 AC136475.10-201ENST00000620253 385 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
PRPF39Q86UA1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.69□□□□□ -1.98
PRPF39Q86UA1 AC006020.1-201ENST00000420179 1854 ntBASIC2.69□□□□□ -1.98
PRPF39Q86UA1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRPF39Q86UA1 Y_RNA.51-201ENST00000362725 102 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 RNU6-942P-201ENST00000363002 107 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 RNA5SP68-201ENST00000363885 119 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 DEFA7P-201ENST00000382676 285 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 RNU6-1119P-201ENST00000384349 108 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 RNU6-843P-201ENST00000384454 104 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 AL591416.1-201ENST00000404015 867 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 RNA5SP508-201ENST00000411327 119 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 AL451074.3-201ENST00000437709 472 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.68□□□□□ -1.98
PRPF39Q86UA1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.68□□□□□ -1.98
PRPF39Q86UA1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.68□□□□□ -1.98
PRPF39Q86UA1 AC092436.1-201ENST00000506450 503 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 AC105417.1-201ENST00000514691 285 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PRPF39Q86UA1 CR383656.8-201ENST00000549046 145 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.68□□□□□ -1.98
PRPF39Q86UA1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.68□□□□□ -1.98
PRPF39Q86UA1 MIR5194-201ENST00000582634 120 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 RMST_4.1-201ENST00000616886 107 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 AL031601.2-202ENST00000622650 282 ntBASIC2.68□□□□□ -1.98
PRPF39Q86UA1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PRPF39Q86UA1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.68□□□□□ -1.98
PRPF39Q86UA1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PRPF39Q86UA1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.67□□□□□ -1.98
PRPF39Q86UA1 RNU5E-7P-201ENST00000365290 117 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 RNU6-393P-201ENST00000384475 107 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 Y_RNA.582-201ENST00000391023 95 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 RNU2-29P-201ENST00000410423 189 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 RNU6-607P-201ENST00000411283 108 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AL096701.2-201ENST00000416920 238 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.67□□□□□ -1.98
PRPF39Q86UA1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.67□□□□□ -1.98
PRPF39Q86UA1 RPL32P28-201ENST00000443577 397 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.67□□□□□ -1.98
PRPF39Q86UA1 SNRPFP3-201ENST00000457792 225 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 GMFBP1-201ENST00000467831 427 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AC093534.1-201ENST00000504977 132 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.67□□□□□ -1.98
PRPF39Q86UA1 LRRC34P2-201ENST00000514850 553 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 SNORA43.2-201ENST00000516652 128 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms