Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE3DQ7Z6J8 AC010469.1-201ENST00000463864 576 ntBASIC4.05□□□□□ -1.76
UBE3DQ7Z6J8 RPS26P28-201ENST00000470806 348 ntBASIC4.05□□□□□ -1.76
UBE3DQ7Z6J8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE3DQ7Z6J8 RNA5SP519-201ENST00000516480 119 ntBASIC4.05□□□□□ -1.76
UBE3DQ7Z6J8 RNU7-110P-201ENST00000516891 62 ntBASIC4.05□□□□□ -1.76
UBE3DQ7Z6J8 MTND6P33-201ENST00000571794 183 ntBASIC4.05□□□□□ -1.76
UBE3DQ7Z6J8 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE3DQ7Z6J8 AC005296.1-201ENST00000616145 209 ntBASIC4.05□□□□□ -1.76
UBE3DQ7Z6J8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE3DQ7Z6J8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
UBE3DQ7Z6J8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE3DQ7Z6J8 AC073073.2-201ENST00000609827 2578 ntBASIC4.05□□□□□ -1.76
UBE3DQ7Z6J8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 AC010733.2-201ENST00000589496 5702 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 MIR448-201ENST00000362131 111 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 RNA5SP197-201ENST00000363357 119 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 RNU1-73P-201ENST00000383971 164 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 RNU6-281P-201ENST00000384212 103 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 U8.10-201ENST00000384260 133 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 MIR10B-201ENST00000385011 110 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 RNU6-159P-201ENST00000391080 106 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 RN7SKP61-201ENST00000410642 295 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 RPL21P66-201ENST00000426566 466 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 NDUFB4P6-201ENST00000436819 366 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 AL451050.1-201ENST00000450126 415 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 SSXP4-201ENST00000451349 245 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 AC109925.1-201ENST00000478069 331 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 PPBPP1-201ENST00000510807 373 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 AC023141.12-201ENST00000512399 199 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 AC019159.1-201ENST00000605094 187 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 BRDTP1-201ENST00000605735 677 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 AC114781.5-201ENST00000615297 108 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 BMS1P21-201ENST00000634565 365 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 AC087190.4-201ENST00000574616 8334 ntBASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3DQ7Z6J8 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 MIR410-201ENST00000362222 80 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 RNU6-1141P-201ENST00000364520 107 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 RNA5SP515-201ENST00000364570 118 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 SNORD50.2-201ENST00000365465 70 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 RNU6-898P-201ENST00000365627 104 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 MIR607-201ENST00000385241 96 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 MIR708-201ENST00000390708 88 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 NDUFS5P4-201ENST00000412983 318 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 AL358075.3-201ENST00000426289 226 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 HLA-N-201ENST00000437516 135 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 AL356535.1-201ENST00000440335 398 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 RN7SL303P-201ENST00000469773 251 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 AC006463.2-201ENST00000473326 348 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 AC078817.1-201ENST00000492623 435 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 AC016632.1-201ENST00000503994 196 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 AL592156.1-201ENST00000508758 304 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 VWA8P1-201ENST00000510889 176 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 Y_RNA.662-201ENST00000516028 97 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 Y_RNA.679-201ENST00000516416 91 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 RNU6-861P-201ENST00000516745 106 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 CYCSP23-201ENST00000519781 313 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 H3F3AP1-201ENST00000559984 334 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 MIR432-201ENST00000606207 94 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 AC015813.4-201ENST00000610469 179 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 FAM27D1-201ENST00000612308 341 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBE3DQ7Z6J8 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
UBE3DQ7Z6J8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UBE3DQ7Z6J8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UBE3DQ7Z6J8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UBE3DQ7Z6J8 AC006971.1-201ENST00000407916 4486 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms