Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC011005.2-201ENST00000487324 359 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 MTND3P25-201ENST00000509243 135 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AC074344.1-201ENST00000512823 224 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 RNU1-86P-201ENST00000516108 154 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 SNORA9.3-201ENST00000516383 129 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 MIR892C-201ENST00000516410 77 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 RNA5SP367-201ENST00000516557 118 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 RNU1-107P-201ENST00000516617 154 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 OR5AQ1P-201ENST00000527596 927 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 HPRT1P3-201ENST00000539521 576 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AC025678.1-201ENST00000567861 338 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AC105245.1-201ENST00000581934 244 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 MIR3605-201ENST00000583214 100 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AC012119.1-201ENST00000603184 222 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AF250324.2-201ENST00000608299 610 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AL137790.1-201ENST00000634283 177 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 RNU6-1280P-201ENST00000365211 107 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 RNU1-138P-201ENST00000384093 164 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 RNU6-434P-201ENST00000384376 107 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 MIR218-1-201ENST00000384999 110 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 MIR10A-201ENST00000385043 110 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 SNORD70.1-201ENST00000391007 85 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 U3.37-201ENST00000408528 213 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 COTL1P1-201ENST00000422309 375 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AC236972.1-201ENST00000433225 199 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AC107083.1-201ENST00000439643 279 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AC011753.1-201ENST00000451001 220 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AC116655.1-201ENST00000508324 901 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 RNU6-581P-201ENST00000516214 105 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 RNU6-835P-201ENST00000516974 104 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AC027807.1-201ENST00000559921 996 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 MTCO3P23-201ENST00000561363 289 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 TPRKBP2-201ENST00000565969 475 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AC106782.4-201ENST00000568264 210 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 LARP7P3-201ENST00000579888 337 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AC068790.6-201ENST00000602558 258 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AC025165.5-201ENST00000602802 578 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AL020991.1-201ENST00000612314 373 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 U4.5-201ENST00000617137 123 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AC022418.1-201ENST00000624118 445 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 AL109809.4-201ENST00000603520 2185 ntBASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NUP54Q7Z3B4 RPL9P7-201ENST00000330965 580 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 MIR26A1-201ENST00000362205 77 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 RNU6-7-201ENST00000364784 107 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 RNU1-100P-201ENST00000365255 165 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 RNU6-8-201ENST00000365467 107 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 Y_RNA.372-201ENST00000365599 102 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 RNU6-780P-201ENST00000391030 104 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 AL590002.1-201ENST00000406554 418 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 RNU2-3P-201ENST00000410144 191 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 AC097462.2-201ENST00000504623 481 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 HIGD1AP13-201ENST00000509878 289 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 RNU2-69P-201ENST00000516061 100 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 AP005902.1-201ENST00000521358 186 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 AL157687.1-201ENST00000554853 619 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 MIR3941-201ENST00000582572 103 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 ELOCP29-201ENST00000588193 334 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
NUP54Q7Z3B4 AC131280.1-202ENST00000624067 4211 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 Y_RNA.6-201ENST00000362350 114 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 Y_RNA.399-201ENST00000383955 105 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 RNU6-72P-201ENST00000384285 79 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms