Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 GDI2P2-201ENST00000445131 608 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.28□□□□□ -2.2
SCXQ7RTU7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.28□□□□□ -2.2
SCXQ7RTU7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.28□□□□□ -2.2
SCXQ7RTU7 MTAPP1-201ENST00000489154 819 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.28□□□□□ -2.2
SCXQ7RTU7 AC091951.3-201ENST00000504093 246 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
SCXQ7RTU7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.28□□□□□ -2.2
SCXQ7RTU7 RNU6-667P-201ENST00000517186 102 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 AC022616.6-201ENST00000520479 119 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 CYCSP27-201ENST00000527643 293 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.28□□□□□ -2.2
SCXQ7RTU7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.28□□□□□ -2.2
SCXQ7RTU7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.28□□□□□ -2.2
SCXQ7RTU7 AC090897.2-201ENST00000581715 130 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 MIR4999-201ENST00000585029 91 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.28□□□□□ -2.2
SCXQ7RTU7 BNIP3P25-201ENST00000596023 559 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 AC073410.2-201ENST00000603240 332 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 SNRPGP17-201ENST00000603780 214 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 AC105148.1-201ENST00000604961 409 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 U2.15-201ENST00000611544 191 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 U2.16-201ENST00000613119 191 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 MIR6845-201ENST00000613182 61 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 U2.12-201ENST00000613778 191 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 U2.20-201ENST00000613956 192 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 U2.9-201ENST00000615427 191 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 U2.11-201ENST00000616345 191 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 U2.2-201ENST00000616535 191 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 U2.3-201ENST00000617785 191 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 U2.19-201ENST00000618602 191 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 RNU2-1-201ENST00000618664 191 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 U2.6-201ENST00000619225 191 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 U2.5-201ENST00000619465 191 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 AL031667.3-201ENST00000620124 655 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 U2.10-201ENST00000620268 191 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.28□□□□□ -2.2
SCXQ7RTU7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.28□□□□□ -2.2
SCXQ7RTU7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SCXQ7RTU7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SCXQ7RTU7 RBBP8P1-201ENST00000449447 1844 ntBASIC1.28□□□□□ -2.2
SCXQ7RTU7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
SCXQ7RTU7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SCXQ7RTU7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.27□□□□□ -2.21
SCXQ7RTU7 AL354685.2-201ENST00000448218 1447 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 AL445523.1-201ENST00000451184 1362 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 SNORD113-6-201ENST00000363345 75 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 RNU6-529P-201ENST00000363383 104 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 RNY4P16-201ENST00000364768 94 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 RNU6-1200P-201ENST00000384162 107 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 MIR186-201ENST00000384988 86 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 Y_RNA.623-201ENST00000411128 95 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.27□□□□□ -2.21
SCXQ7RTU7 AL627311.1-201ENST00000431514 115 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 CR769776.1-201ENST00000441254 787 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.27□□□□□ -2.21
SCXQ7RTU7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SCXQ7RTU7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.27□□□□□ -2.21
SCXQ7RTU7 AL583843.1-201ENST00000456070 346 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 DUXAP8-207ENST00000456786 622 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 AC006512.1-201ENST00000468816 291 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.27□□□□□ -2.21
SCXQ7RTU7 Y_RNA.689-201ENST00000516589 107 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 RNU6-586P-201ENST00000517265 104 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.27□□□□□ -2.21
SCXQ7RTU7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.27□□□□□ -2.21
SCXQ7RTU7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.27□□□□□ -2.21
SCXQ7RTU7 CBX3P4-201ENST00000538909 354 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 GNAI2P1-201ENST00000541815 315 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.27□□□□□ -2.21
SCXQ7RTU7 AC022254.1-201ENST00000567857 235 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.27□□□□□ -2.21
SCXQ7RTU7 MTCO2P2-201ENST00000591258 225 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 AL138889.2-201ENST00000603883 242 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 AL031281.1-201ENST00000604049 488 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 AC012493.3-201ENST00000604494 112 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 AC021646.1-201ENST00000605469 484 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 AC126118.1-201ENST00000607744 628 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 AL607023.1-201ENST00000620045 248 ntBASIC1.27□□□□□ -2.21
SCXQ7RTU7 ZNF876P-202ENST00000398732 1485 ntBASIC1.26□□□□□ -2.21
SCXQ7RTU7 RNU6-622P-201ENST00000384272 103 ntBASIC1.26□□□□□ -2.21
SCXQ7RTU7 RNU6-72P-201ENST00000384285 79 ntBASIC1.26□□□□□ -2.21
SCXQ7RTU7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SCXQ7RTU7 SNORA26.9-201ENST00000391322 122 ntBASIC1.26□□□□□ -2.21
SCXQ7RTU7 RNU2-48P-201ENST00000410694 191 ntBASIC1.26□□□□□ -2.21
SCXQ7RTU7 AC027124.2-201ENST00000428249 105 ntBASIC1.26□□□□□ -2.21
SCXQ7RTU7 RPL23AP30-201ENST00000432419 501 ntBASIC1.26□□□□□ -2.21
SCXQ7RTU7 MTCO3P5-201ENST00000433620 714 ntBASIC1.26□□□□□ -2.21
SCXQ7RTU7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.26□□□□□ -2.21
SCXQ7RTU7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.26□□□□□ -2.21
SCXQ7RTU7 AL591719.1-201ENST00000444669 744 ntBASIC1.26□□□□□ -2.21
SCXQ7RTU7 AL606662.1-201ENST00000445763 553 ntBASIC1.26□□□□□ -2.21
SCXQ7RTU7 AL606517.1-201ENST00000446914 387 ntBASIC1.26□□□□□ -2.21
SCXQ7RTU7 SSXP1-201ENST00000453640 473 ntBASIC1.26□□□□□ -2.21
SCXQ7RTU7 HMGB1P30-201ENST00000492455 606 ntBASIC1.26□□□□□ -2.21
SCXQ7RTU7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.26□□□□□ -2.21
SCXQ7RTU7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.26□□□□□ -2.21
SCXQ7RTU7 RNA5SP458-201ENST00000516188 119 ntBASIC1.26□□□□□ -2.21
SCXQ7RTU7 RNU2-53P-201ENST00000516257 147 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms