Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 AC245291.1-201ENST00000419501 328 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 RPL23AP82-202ENST00000427528 469 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 AC006946.1-201ENST00000429106 328 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 U8.18-201ENST00000459285 133 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-1037P-201ENST00000459571 107 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 CENPBD1P1-201ENST00000464061 469 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 RN7SL385P-201ENST00000468873 276 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 AC103987.1-201ENST00000473394 348 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 AC021205.2-201ENST00000480069 347 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 AC090096.1-201ENST00000489168 390 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 RNA5SP384-201ENST00000516615 116 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 Y_RNA.711-201ENST00000516993 102 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 SNRPGP18-201ENST00000553000 214 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 AC103996.1-201ENST00000555468 102 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 MIR5685-201ENST00000579080 79 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 AL591516.1-201ENST00000611326 274 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 PART1_1.1-201ENST00000611761 217 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 AP003355.3-201ENST00000623465 114 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 AC119674.1-207ENST00000641355 633 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 AC092435.3-201ENST00000565538 3654 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AC233263.6-201ENST00000631132 1963 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AC093908.1-201ENST00000623125 8092 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-1317P-201ENST00000364582 104 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-805P-201ENST00000365643 106 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 SNORA75.6-201ENST00000391318 127 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 SNORA11B-201ENST00000408175 129 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AL117339.3-201ENST00000418733 162 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AC099548.1-201ENST00000421443 426 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 USMG5P1-201ENST00000425964 177 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AL133396.1-201ENST00000432048 687 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 RPS15AP10-201ENST00000432472 382 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AC125238.1-201ENST00000448842 249 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 RPL37P4-201ENST00000448908 268 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AC008571.1-201ENST00000467232 300 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AL163540.1-201ENST00000485382 386 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 PTP4A1P4-201ENST00000512479 322 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 SCARNA16.2-201ENST00000516520 172 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 SNORA64.4-201ENST00000516632 81 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 LINC00933-203ENST00000559812 219 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AC109446.1-201ENST00000566172 220 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AC009314.1-201ENST00000603871 304 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 HSPE1P7-201ENST00000604681 321 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AC012468.1-201ENST00000604888 430 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AC019176.2-201ENST00000611579 315 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 AC040896.1-201ENST00000613819 479 ntBASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTCHD4Q6ZW05 RPL9P7-201ENST00000330965 580 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 RNA5SP383-201ENST00000362934 120 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-428P-201ENST00000362942 107 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 RNU5E-7P-201ENST00000365290 117 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-898P-201ENST00000365627 104 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-933P-201ENST00000384424 107 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-692P-201ENST00000384496 107 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 AC017079.2-201ENST00000416102 485 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 PMCHL1-202ENST00000423102 261 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 AC007389.2-201ENST00000434630 306 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 AL513043.1-201ENST00000439124 535 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 AL137792.2-201ENST00000443484 235 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 RPL9P9-202ENST00000466501 579 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 RPS26P21-201ENST00000475397 348 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 RPS29P20-201ENST00000489592 171 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 AC092185.1-201ENST00000491371 97 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 AK3P2-201ENST00000507976 429 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 SMURF2P1-201ENST00000514992 481 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 MIR3609-201ENST00000582661 80 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 MTND4LP5-201ENST00000605152 292 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 MIR3976-201ENST00000606807 139 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 AC011890.2-201ENST00000613393 294 ntBASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms