Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC092125.1-201ENST00000562568 1995 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 AC138393.1-203ENST00000327086 343 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 SNORA4.1-201ENST00000364263 144 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 RNU6-1074P-201ENST00000383995 104 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 MIR200A-201ENST00000384875 90 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 AL591034.2-201ENST00000402839 359 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 AL449283.1-202ENST00000418249 604 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 MICF-203ENST00000432679 129 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 TPMTP4-201ENST00000450749 678 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 LARP1BP2-201ENST00000486594 519 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 SNORA70.22-201ENST00000517160 124 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 RNU4-12P-201ENST00000365233 139 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 MIR942-201ENST00000401111 86 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 RPL30P7-201ENST00000479312 323 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 AL022345.1-201ENST00000607292 135 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 HMGN2P34-201ENST00000437647 269 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 Z82190.1-201ENST00000454534 490 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AC105758.1-201ENST00000506038 399 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AC022616.8-201ENST00000533569 253 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 RAC1P9-201ENST00000604990 392 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 MIR320B1-201ENST00000390209 79 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 HMGB1P29-201ENST00000505659 499 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 RNA5SP255-201ENST00000516370 107 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 MTND2P17-201ENST00000550281 688 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AC019131.2-201ENST00000609071 870 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 SNORD18A-201ENST00000363753 72 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 RNU6-654P-201ENST00000364373 107 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 MIR518D-201ENST00000385014 87 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 MT-TP-201ENST00000387461 68 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 RNU6-1328P-201ENST00000410938 106 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AC093534.1-201ENST00000504977 132 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 MIR6134-201ENST00000617606 109 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AC025465.3-201ENST00000510570 311 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AC105185.1-201ENST00000518705 535 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 OR5AK1P-201ENST00000524837 922 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AL158211.1-201ENST00000566763 763 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AC002400.1-201ENST00000569310 726 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 MIR4764-201ENST00000580680 88 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AC073349.3-201ENST00000617616 186 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 AC106858.1-201ENST00000637497 429 ntBASIC-0.08□□□□□ -2.42
VPS13DQ5THJ4 RNU6-1035P-201ENST00000384477 107 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 AL160275.3-201ENST00000423876 471 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 AC097499.1-201ENST00000444277 208 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 RPL7P43-201ENST00000478876 753 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 SCARNA8-201ENST00000515924 131 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 AC107954.1-201ENST00000565906 727 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 MIR8074-201ENST00000615081 81 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 MIR95-201ENST00000385072 81 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 SNORD12-201ENST00000391002 90 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 AC099677.1-201ENST00000420575 175 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 SPINT5P-201ENST00000448174 155 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 AC002350.1-201ENST00000490759 375 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 AC108740.1-201ENST00000498629 225 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 RNA5SP137-201ENST00000516833 135 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 RNA5SP503-201ENST00000517047 117 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 MZT1P2-201ENST00000604387 248 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 RNA5SP98-201ENST00000363158 137 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 MTCO1P53-201ENST00000441633 699 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 Z77249.1-201ENST00000444622 1175 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 AC016065.2-201ENST00000514530 444 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 SNORA40.12-201ENST00000516329 111 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 AC022432.1-201ENST00000595739 310 ntBASIC-0.09□□□□□ -2.42
VPS13DQ5THJ4 RNA5SP300-201ENST00000391197 107 ntBASIC-0.1□□□□□ -2.42
VPS13DQ5THJ4 RNA5SP501-201ENST00000410990 112 ntBASIC-0.1□□□□□ -2.42
VPS13DQ5THJ4 AC139712.2-201ENST00000424302 339 ntBASIC-0.1□□□□□ -2.42
VPS13DQ5THJ4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC-0.1□□□□□ -2.42
VPS13DQ5THJ4 MTND2P8-201ENST00000450555 1025 ntBASIC-0.1□□□□□ -2.42
VPS13DQ5THJ4 HMGN1P13-201ENST00000505795 138 ntBASIC-0.1□□□□□ -2.42
VPS13DQ5THJ4 AC087897.1-201ENST00000550134 156 ntBASIC-0.1□□□□□ -2.42
VPS13DQ5THJ4 HMGN2P15-201ENST00000585707 270 ntBASIC-0.1□□□□□ -2.42
VPS13DQ5THJ4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.1□□□□□ -2.42
VPS13DQ5THJ4 AC024257.5-201ENST00000612739 531 ntBASIC-0.1□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms